T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 19640..47783
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDH37_RS25235 (LDH37_25255) | 19640..21901 | - | 2262 | WP_046072940 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LDH37_RS25240 (LDH37_25260) | 21952..22689 | - | 738 | WP_000199905 | hypothetical protein | - |
| LDH37_RS25245 (LDH37_25265) | 22892..23623 | - | 732 | WP_000782451 | conjugal transfer complement resistance protein TraT | - |
| LDH37_RS25250 (LDH37_25270) | 23672..24157 | - | 486 | WP_000605870 | hypothetical protein | - |
| LDH37_RS25255 (LDH37_25275) | 24173..26995 | - | 2823 | WP_001007039 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LDH37_RS25260 (LDH37_25280) | 26992..28374 | - | 1383 | WP_001309243 | conjugal transfer pilus assembly protein TraH | traH |
| LDH37_RS25265 (LDH37_25285) | 28352..28744 | - | 393 | WP_000660699 | F-type conjugal transfer protein TrbF | - |
| LDH37_RS25270 (LDH37_25290) | 28725..29072 | - | 348 | WP_001309242 | P-type conjugative transfer protein TrbJ | - |
| LDH37_RS25275 (LDH37_25295) | 29002..29547 | - | 546 | WP_000059831 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LDH37_RS25280 (LDH37_25300) | 29534..29818 | - | 285 | WP_000624194 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LDH37_RS25285 (LDH37_25305) | 29937..30281 | - | 345 | WP_000556796 | conjugal transfer protein TrbA | - |
| LDH37_RS25290 (LDH37_25310) | 30295..31044 | - | 750 | WP_001336806 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LDH37_RS25295 (LDH37_25315) | 31031..31288 | - | 258 | WP_000864353 | conjugal transfer protein TrbE | - |
| LDH37_RS25300 (LDH37_25320) | 31315..33165 | - | 1851 | WP_000821856 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LDH37_RS25305 (LDH37_25325) | 33162..33800 | - | 639 | WP_001080256 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LDH37_RS25310 (LDH37_25330) | 33809..34114 | - | 306 | WP_000224416 | hypothetical protein | - |
| LDH37_RS25315 (LDH37_25335) | 34144..35136 | - | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| LDH37_RS25320 (LDH37_25340) | 35133..35765 | - | 633 | WP_001203728 | type-F conjugative transfer system protein TraW | traW |
| LDH37_RS25325 (LDH37_25345) | 35762..36148 | - | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| LDH37_RS25330 (LDH37_25350) | 36145..38775 | - | 2631 | WP_000069777 | type IV secretion system protein TraC | virb4 |
| LDH37_RS25335 (LDH37_25355) | 38901..39248 | - | 348 | WP_000836682 | hypothetical protein | - |
| LDH37_RS25340 (LDH37_25360) | 39276..39494 | - | 219 | WP_000556745 | hypothetical protein | - |
| LDH37_RS25345 (LDH37_25365) | 39574..40050 | - | 477 | WP_000549587 | hypothetical protein | - |
| LDH37_RS25350 (LDH37_25370) | 40043..40264 | - | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| LDH37_RS25355 (LDH37_25375) | 40399..40914 | - | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| LDH37_RS25360 (LDH37_25380) | 40911..41231 | - | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| LDH37_RS25365 (LDH37_25385) | 41218..41784 | - | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| LDH37_RS25370 (LDH37_25390) | 41774..43225 | - | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LDH37_RS25375 (LDH37_25395) | 43225..43953 | - | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| LDH37_RS25380 (LDH37_25400) | 43940..44506 | - | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| LDH37_RS25385 (LDH37_25405) | 44528..44839 | - | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| LDH37_RS25390 (LDH37_25410) | 44854..45213 | - | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| LDH37_RS25395 (LDH37_25415) | 45246..45473 | - | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| LDH37_RS25400 (LDH37_25420) | 45610..46281 | - | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| LDH37_RS25405 (LDH37_25425) | 46475..46858 | - | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LDH37_RS25410 (LDH37_25430) | 47193..47783 | + | 591 | WP_000252683 | transglycosylase SLT domain-containing protein | virB1 |
| LDH37_RS25415 (LDH37_25435) | 48080..48901 | - | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| LDH37_RS25420 (LDH37_25440) | 49012..49308 | - | 297 | WP_001272251 | hypothetical protein | - |
| LDH37_RS25425 (LDH37_25445) | 49608..49904 | + | 297 | Protein_61 | hypothetical protein | - |
| LDH37_RS25430 (LDH37_25450) | 50223..50348 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| LDH37_RS25435 (LDH37_25455) | 50290..50439 | - | 150 | Protein_63 | plasmid maintenance protein Mok | - |
| LDH37_RS25440 (LDH37_25460) | 50661..51380 | - | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| LDH37_RS25445 (LDH37_25465) | 51377..51811 | - | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |