T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48693..57783
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5E20_RS00345 | 44724..44957 | - | 234 | WP_001191892 | hypothetical protein | - |
| H5E20_RS00350 | 44939..45556 | - | 618 | WP_001249396 | hypothetical protein | - |
| H5E20_RS00355 | 45724..48696 | + | 2973 | WP_064986968 | MobH family relaxase | - |
| H5E20_RS00360 | 48693..50558 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| H5E20_RS00365 | 50569..51153 | + | 585 | WP_000332868 | hypothetical protein | - |
| H5E20_RS00370 | 51110..51739 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| H5E20_RS00375 | 51749..52195 | + | 447 | WP_000122507 | hypothetical protein | - |
| H5E20_RS00380 | 52205..52582 | + | 378 | WP_000869297 | hypothetical protein | - |
| H5E20_RS00385 | 52582..53244 | + | 663 | WP_001231464 | hypothetical protein | - |
| H5E20_RS00390 | 53425..53568 | + | 144 | WP_001275801 | hypothetical protein | - |
| H5E20_RS00395 | 53580..53945 | + | 366 | WP_001052530 | hypothetical protein | - |
| H5E20_RS00400 | 54090..54371 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| H5E20_RS00405 | 54368..54994 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| H5E20_RS00410 | 54978..55895 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| H5E20_RS00415 | 55895..57208 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| H5E20_RS00420 | 57205..57783 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| H5E20_RS00425 | 57787..58179 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| H5E20_RS00430 | 58464..59674 | + | 1211 | Protein_86 | IS1380-like element ISEcp1 family transposase | - |
| H5E20_RS00440 | 60826..61971 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| H5E20_RS00445 | 62065..62598 | + | 534 | WP_001221666 | lipocalin family protein | - |