T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 88069..116952
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG30_RS25865 (RG30_24580) | 84422..84856 | + | 435 | WP_073534309 | conjugation system SOS inhibitor PsiB | - |
| RG30_RS25870 (RG30_24585) | 84853..85594 | + | 742 | Protein_92 | plasmid SOS inhibition protein A | - |
| RG30_RS28195 | 85785..85934 | + | 150 | Protein_93 | DUF5431 family protein | - |
| RG30_RS25880 (RG30_24595) | 85876..86001 | + | 126 | WP_096937776 | type I toxin-antitoxin system Hok family toxin | - |
| RG30_RS28410 | 86242..86490 | - | 249 | Protein_95 | hypothetical protein | - |
| RG30_RS25890 (RG30_24605) | 86548..86833 | + | 286 | Protein_96 | hypothetical protein | - |
| RG30_RS27760 (RG30_24610) | 86953..87773 | + | 821 | Protein_97 | DUF932 domain-containing protein | - |
| RG30_RS25900 (RG30_24615) | 88069..88716 | - | 648 | WP_149026021 | transglycosylase SLT domain-containing protein | virB1 |
| RG30_RS25915 (RG30_24620) | 88992..89375 | + | 384 | WP_073534310 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| RG30_RS25920 (RG30_24625) | 89570..90217 | + | 648 | WP_073534311 | transcriptional regulator TraJ family protein | - |
| RG30_RS25925 (RG30_24630) | 90336..90563 | + | 228 | WP_033800806 | conjugal transfer relaxosome protein TraY | - |
| RG30_RS25930 (RG30_24635) | 90597..90956 | + | 360 | WP_073534312 | type IV conjugative transfer system pilin TraA | - |
| RG30_RS25935 (RG30_24640) | 90971..91282 | + | 312 | WP_000012118 | type IV conjugative transfer system protein TraL | traL |
| RG30_RS25940 (RG30_24645) | 91304..91870 | + | 567 | WP_059257107 | type IV conjugative transfer system protein TraE | traE |
| RG30_RS25945 (RG30_24650) | 91857..92585 | + | 729 | WP_059257106 | type-F conjugative transfer system secretin TraK | traK |
| RG30_RS25950 (RG30_24655) | 92585..94012 | + | 1428 | WP_073534313 | F-type conjugal transfer pilus assembly protein TraB | traB |
| RG30_RS25955 (RG30_24660) | 94002..94586 | + | 585 | WP_059257104 | conjugal transfer pilus-stabilizing protein TraP | - |
| RG30_RS25960 (RG30_24665) | 94573..94893 | + | 321 | WP_073534314 | conjugal transfer protein TrbD | - |
| RG30_RS25965 (RG30_24670) | 94890..95405 | + | 516 | WP_073534315 | type IV conjugative transfer system lipoprotein TraV | traV |
| RG30_RS25970 (RG30_24675) | 95540..95761 | + | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| RG30_RS25975 (RG30_24680) | 95921..98548 | + | 2628 | WP_073534316 | type IV secretion system protein TraC | virb4 |
| RG30_RS25980 (RG30_24685) | 98545..98931 | + | 387 | WP_073534317 | type-F conjugative transfer system protein TrbI | - |
| RG30_RS25985 (RG30_24690) | 98928..99560 | + | 633 | WP_073534318 | type-F conjugative transfer system protein TraW | traW |
| RG30_RS25990 (RG30_24695) | 99557..100549 | + | 993 | WP_059257098 | conjugal transfer pilus assembly protein TraU | traU |
| RG30_RS25995 (RG30_24700) | 100578..100913 | + | 336 | WP_073534319 | hypothetical protein | - |
| RG30_RS26000 (RG30_24705) | 100906..101358 | + | 453 | WP_073534320 | hypothetical protein | - |
| RG30_RS26005 (RG30_24710) | 101386..102024 | + | 639 | WP_073534321 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| RG30_RS26010 (RG30_24715) | 102021..102392 | + | 372 | WP_059257095 | hypothetical protein | - |
| RG30_RS26015 (RG30_24720) | 102417..102839 | + | 423 | WP_073534322 | HNH endonuclease signature motif containing protein | - |
| RG30_RS26020 (RG30_24725) | 102836..104644 | + | 1809 | WP_073534323 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| RG30_RS26025 (RG30_24730) | 104671..104928 | + | 258 | WP_073534324 | conjugal transfer protein TrbE | - |
| RG30_RS26030 (RG30_24735) | 104921..105664 | + | 744 | WP_059257092 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| RG30_RS26035 (RG30_24740) | 105678..106019 | + | 342 | WP_023181031 | conjugal transfer protein TrbA | - |
| RG30_RS26040 (RG30_24745) | 106000..106335 | - | 336 | WP_059257091 | hypothetical protein | - |
| RG30_RS26045 (RG30_24750) | 106417..106701 | + | 285 | WP_059257090 | type-F conjugative transfer system pilin chaperone TraQ | - |
| RG30_RS26050 (RG30_24755) | 106688..107239 | + | 552 | WP_073534325 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| RG30_RS26055 (RG30_24760) | 107255..107785 | + | 531 | WP_073534326 | hypothetical protein | - |
| RG30_RS26065 (RG30_24770) | 108267..109592 | + | 1326 | WP_249531568 | conjugal transfer pilus assembly protein TraH | traH |
| RG30_RS26070 (RG30_24775) | 109589..112426 | + | 2838 | WP_073534329 | conjugal transfer mating-pair stabilization protein TraG | traG |
| RG30_RS26075 (RG30_24780) | 112459..112965 | + | 507 | WP_073534330 | conjugal transfer entry exclusion protein TraS | - |
| RG30_RS26080 (RG30_24785) | 113020..113733 | + | 714 | WP_077899822 | conjugal transfer complement resistance protein TraT | - |
| RG30_RS26085 (RG30_24790) | 113936..114676 | + | 741 | WP_073534332 | hypothetical protein | - |
| RG30_RS26090 (RG30_24795) | 114727..116952 | + | 2226 | WP_073534333 | type IV conjugative transfer system coupling protein TraD | prgC |
| RG30_RS26095 (RG30_24800) | 116961..117359 | - | 399 | WP_059257082 | tRNA(fMet)-specific endonuclease VapC | - |
| RG30_RS26100 (RG30_24805) | 117359..117586 | - | 228 | WP_000450526 | toxin-antitoxin system antitoxin VapB | - |