T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 41588..71263
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTM02_RS00215 | 41588..43900 | - | 2313 | WP_004152620 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HTM02_RS00220 | 44029..44718 | - | 690 | WP_015065540 | hypothetical protein | - |
| HTM02_RS00225 | 44910..45641 | - | 732 | WP_172690485 | conjugal transfer complement resistance protein TraT | - |
| HTM02_RS00230 | 45825..46373 | - | 549 | WP_004152623 | conjugal transfer entry exclusion protein TraS | - |
| HTM02_RS00235 | 46386..49235 | - | 2850 | WP_172690480 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HTM02_RS00240 | 49235..50614 | - | 1380 | WP_023158000 | conjugal transfer pilus assembly protein TraH | traH |
| HTM02_RS00245 | 50592..51035 | - | 444 | WP_023158001 | F-type conjugal transfer protein TrbF | - |
| HTM02_RS00250 | 51051..51434 | - | 384 | Protein_52 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HTM02_RS00255 | 51437..51643 | - | 207 | Protein_53 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HTM02_RS00260 | 51654..52406 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HTM02_RS00265 | 52427..52749 | - | 323 | Protein_55 | hypothetical protein | - |
| HTM02_RS00270 | 52762..53010 | - | 249 | WP_004152675 | hypothetical protein | - |
| HTM02_RS00275 | 52988..53242 | - | 255 | WP_015065558 | conjugal transfer protein TrbE | - |
| HTM02_RS01115 | 53274..55215 | - | 1942 | Protein_58 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HTM02_RS00295 | 55274..55921 | - | 648 | WP_015632510 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HTM02_RS00300 | 56197..57186 | - | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| HTM02_RS00305 | 57183..57584 | - | 402 | WP_023158005 | hypothetical protein | - |
| HTM02_RS00310 | 57619..58254 | - | 636 | WP_023158006 | type-F conjugative transfer system protein TraW | traW |
| HTM02_RS00315 | 58254..58643 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| HTM02_RS00320 | 58643..61282 | - | 2640 | WP_172690483 | type IV secretion system protein TraC | virb4 |
| HTM02_RS00325 | 61354..61752 | - | 399 | WP_011977783 | hypothetical protein | - |
| HTM02_RS00330 | 61760..62155 | - | 396 | WP_228718985 | hypothetical protein | - |
| HTM02_RS01120 | 62189..62590 | - | 402 | Protein_67 | hypothetical protein | - |
| HTM02_RS00340 | 62657..62968 | - | 312 | WP_004152502 | hypothetical protein | - |
| HTM02_RS00345 | 62969..63187 | - | 219 | WP_004152501 | hypothetical protein | - |
| HTM02_RS00350 | 63293..63703 | - | 411 | WP_004152499 | hypothetical protein | - |
| HTM02_RS00355 | 63835..64419 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTM02_RS00360 | 64442..65038 | - | 597 | Protein_72 | conjugal transfer pilus-stabilizing protein TraP | - |
| HTM02_RS00365 | 65031..66455 | - | 1425 | WP_087603416 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HTM02_RS00370 | 66455..67293 | - | 839 | Protein_74 | type-F conjugative transfer system secretin TraK | - |
| HTM02_RS00375 | 67378..67944 | - | 567 | WP_087588278 | type IV conjugative transfer system protein TraE | traE |
| HTM02_RS00380 | 67964..68269 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| HTM02_RS00385 | 68283..68651 | - | 369 | WP_172690484 | type IV conjugative transfer system pilin TraA | - |
| HTM02_RS00390 | 68713..68919 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| HTM02_RS00395 | 69052..69771 | - | 720 | WP_016831034 | conjugal transfer protein TrbJ | - |
| HTM02_RS00400 | 69971..70387 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HTM02_RS00405 | 70778..71263 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| HTM02_RS00410 | 71296..71625 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| HTM02_RS00415 | 71658..72479 | - | 822 | WP_087588261 | DUF932 domain-containing protein | - |
| HTM02_RS00420 | 73299..73855 | - | 557 | Protein_84 | methyltransferase | - |
| HTM02_RS00425 | 73905..75216 | - | 1312 | Protein_85 | DUF3560 domain-containing protein | - |
| HTM02_RS00430 | 75291..75521 | - | 231 | WP_001568051 | hypothetical protein | - |
| HTM02_RS00435 | 75575..75833 | - | 259 | Protein_87 | hypothetical protein | - |
| HTM02_RS00440 | 75851..76021 | - | 171 | WP_023158018 | hypothetical protein | - |