T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 11785..39080
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTD49_RS00070 | 6870..7181 | + | 312 | WP_004187333 | hypothetical protein | - |
| HTD49_RS00075 | 7314..7850 | + | 537 | WP_004187332 | hypothetical protein | - |
| HTD49_RS00080 | 8312..8746 | - | 435 | WP_227648722 | MobC | - |
| HTD49_RS00425 | 8745..9308 | + | 564 | WP_020277892 | plasmid mobilization protein MobA | - |
| HTD49_RS00090 | 9295..11274 | + | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| HTD49_RS00095 | 11288..11788 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| HTD49_RS00100 | 11785..12564 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| HTD49_RS00105 | 12575..13738 | + | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| HTD49_RS00110 | 13728..13988 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| HTD49_RS00430 | 14013..15968 | + | 1956 | WP_227626114 | DUF5710 domain-containing protein | - |
| HTD49_RS00115 | 15983..17449 | + | 1467 | WP_227648723 | LPD7 domain-containing protein | - |
| HTD49_RS00120 | 17415..17927 | + | 513 | WP_011091071 | hypothetical protein | traL |
| HTD49_RS00125 | 17928..18125 | - | 198 | WP_004187464 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| HTD49_RS00130 | 18112..18522 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| HTD49_RS00135 | 18521..19303 | + | 783 | WP_015058941 | DotI/IcmL family type IV secretion protein | traM |
| HTD49_RS00140 | 19312..20463 | + | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| HTD49_RS00145 | 20475..21824 | + | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| HTD49_RS00150 | 21836..22540 | + | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| HTD49_RS00155 | 22564..23094 | + | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| HTD49_RS00160 | 23111..23500 | + | 390 | WP_004187479 | DUF6750 family protein | traR |
| HTD49_RS00165 | 23546..23938 | + | 393 | WP_227626115 | hypothetical protein | - |
| HTD49_RS00170 | 24036..27086 | + | 3051 | WP_004187482 | hypothetical protein | traU |
| HTD49_RS00175 | 27083..28291 | + | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| HTD49_RS00180 | 28288..28884 | + | 597 | WP_032419542 | hypothetical protein | - |
| HTD49_RS00185 | 28877..31072 | + | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| HTD49_RS00190 | 31074..31727 | + | 654 | WP_015060005 | hypothetical protein | - |
| HTD49_RS00195 | 31796..32038 | + | 243 | WP_023893611 | IncL/M type plasmid replication protein RepC | - |
| HTD49_RS00200 | 32322..33389 | + | 1068 | WP_019725043 | plasmid replication initiator RepA | - |
| HTD49_RS00445 | 34612..34707 | + | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| HTD49_RS00205 | 34757..36844 | - | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| HTD49_RS00210 | 36857..37807 | - | 951 | WP_004206886 | DsbC family protein | trbB |
| HTD49_RS00215 | 37818..39080 | - | 1263 | WP_004206887 | hypothetical protein | trbA |
| HTD49_RS00435 | 39124..39309 | - | 186 | WP_227626116 | hypothetical protein | - |
| HTD49_RS00225 | 39624..40019 | - | 396 | WP_015059989 | DUF1496 domain-containing protein | - |
| HTD49_RS00230 | 40087..40521 | + | 435 | Protein_47 | CPBP family intramembrane glutamate endopeptidase | - |
| HTD49_RS00235 | 40536..41744 | - | 1209 | WP_001206290 | IS4-like element IS10A family transposase | - |
| HTD49_RS00240 | 42047..42958 | + | 912 | WP_015586033 | LysR family transcriptional regulator | - |
| HTD49_RS00245 | 43260..44057 | - | 798 | WP_015059991 | OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-48 | - |