T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 22524..42366
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTC36_RS00120 | 18369..19802 | - | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |
| HTC36_RS00125 | 19901..20173 | + | 273 | Protein_24 | IS1 family transposase | - |
| HTC36_RS00130 | 20184..20390 | - | 207 | WP_001749967 | hypothetical protein | - |
| HTC36_RS00135 | 20395..21042 | - | 648 | WP_015344958 | restriction endonuclease | - |
| HTC36_RS00140 | 21092..21325 | - | 234 | WP_001191790 | hypothetical protein | - |
| HTC36_RS00145 | 21439..21753 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HTC36_RS00150 | 21750..22094 | - | 345 | WP_001749964 | hypothetical protein | - |
| HTC36_RS00155 | 22110..22481 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| HTC36_RS00160 | 22524..23258 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| HTC36_RS00165 | 23267..23548 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| HTC36_RS00170 | 23558..23851 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| HTC36_RS00175 | 23901..24218 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| HTC36_RS00180 | 24218..26818 | + | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HTC36_RS00185 | 26836..27549 | + | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| HTC36_RS00190 | 27557..27784 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| HTC36_RS00195 | 27800..28840 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| HTC36_RS00200 | 28911..29069 | + | 159 | WP_012561180 | hypothetical protein | - |
| HTC36_RS00205 | 29059..29757 | + | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| HTC36_RS00210 | 29768..30652 | + | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HTC36_RS00215 | 30652..31812 | + | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| HTC36_RS00220 | 31854..32849 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HTC36_RS00225 | 32849..33382 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| HTC36_RS00375 | 33556..34008 | - | 453 | WP_001749956 | DUF6710 family protein | - |
| HTC36_RS00240 | 34319..34561 | + | 243 | WP_000844627 | transposase | - |
| HTC36_RS00245 | 34593..35243 | - | 651 | WP_000164043 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HTC36_RS00250 | 35349..36548 | + | 1200 | WP_012579085 | tetracycline efflux MFS transporter Tet(A) | - |
| HTC36_RS00255 | 36580..37233 | - | 654 | Protein_49 | EamA family transporter | - |
| HTC36_RS00260 | 37428..37601 | - | 174 | WP_001749978 | hypothetical protein | - |
| HTC36_RS00265 | 37601..40837 | - | 3237 | WP_060435336 | MobF family relaxase | - |
| HTC36_RS00270 | 40837..42366 | - | 1530 | WP_001749976 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| HTC36_RS00275 | 42368..42784 | - | 417 | WP_001749975 | hypothetical protein | - |
| HTC36_RS00370 | 43275..43694 | + | 420 | WP_001749974 | plasmid stabilization protein StbA | - |
| HTC36_RS00285 | 43703..44419 | + | 717 | WP_001749973 | StbB family protein | - |
| HTC36_RS00290 | 44421..44789 | + | 369 | WP_001749972 | plasmid stabilization protein StbC | - |
| HTC36_RS00295 | 44971..45315 | + | 345 | WP_000999874 | hypothetical protein | - |
| HTC36_RS00300 | 45426..45746 | - | 321 | WP_001749971 | protein CcgAII | - |
| HTC36_RS00305 | 45801..45980 | - | 180 | WP_000214483 | protein CcgAI | - |
| HTC36_RS00310 | 46657..47166 | - | 510 | WP_000129958 | antirestriction protein ArdA | - |