T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 34961..61372
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG28_RS28465 (RG28_27090) | 34961..37150 | - | 2190 | WP_073521274 | type IV conjugative transfer system coupling protein TraD | virb4 |
| RG28_RS28470 (RG28_27095) | 37402..38133 | - | 732 | WP_073521275 | conjugal transfer complement resistance protein TraT | - |
| RG28_RS28475 (RG28_27100) | 38147..38656 | - | 510 | WP_000628099 | conjugal transfer entry exclusion protein TraS | - |
| RG28_RS28480 (RG28_27105) | 38653..41499 | - | 2847 | WP_073521276 | conjugal transfer mating-pair stabilization protein TraG | traG |
| RG28_RS28485 (RG28_27110) | 41496..42869 | - | 1374 | WP_073521353 | conjugal transfer pilus assembly protein TraH | traH |
| RG28_RS32600 (RG28_27115) | 42856..43248 | - | 393 | WP_249530987 | F-type conjugal transfer protein TrbF | - |
| RG28_RS32605 | 43202..43517 | - | 316 | Protein_46 | P-type conjugative transfer protein TrbJ | - |
| RG28_RS28495 (RG28_27120) | 43507..44052 | - | 546 | WP_073521277 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| RG28_RS28500 (RG28_27125) | 44039..44323 | - | 285 | WP_040089429 | type-F conjugative transfer system pilin chaperone TraQ | - |
| RG28_RS28505 (RG28_27130) | 44404..44718 | + | 315 | WP_000415566 | protein ArtA | - |
| RG28_RS28510 (RG28_27135) | 44720..45067 | - | 348 | WP_073521278 | conjugal transfer protein TrbA | - |
| RG28_RS28515 (RG28_27140) | 45083..45826 | - | 744 | WP_001030378 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| RG28_RS28520 (RG28_27145) | 45819..46076 | - | 258 | WP_073521279 | conjugal transfer protein TrbE | - |
| RG28_RS28525 (RG28_27150) | 46103..47965 | - | 1863 | WP_249530988 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| RG28_RS28530 (RG28_27155) | 48201..48581 | - | 381 | WP_039052469 | hypothetical protein | - |
| RG28_RS28535 (RG28_27160) | 48578..49216 | - | 639 | WP_040089490 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| RG28_RS28540 (RG28_27165) | 49244..49696 | - | 453 | WP_057698276 | hypothetical protein | - |
| RG28_RS28545 (RG28_27170) | 49689..50024 | - | 336 | WP_057698277 | hypothetical protein | - |
| RG28_RS28550 (RG28_27175) | 50053..51045 | - | 993 | WP_073521280 | conjugal transfer pilus assembly protein TraU | traU |
| RG28_RS28555 (RG28_27180) | 51042..51674 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| RG28_RS28560 (RG28_27185) | 51671..52057 | - | 387 | WP_073521281 | type-F conjugative transfer system protein TrbI | - |
| RG28_RS28565 (RG28_27190) | 52054..54684 | - | 2631 | WP_073521282 | type IV secretion system protein TraC | virb4 |
| RG28_RS31575 (RG28_27195) | 54811..55173 | - | 363 | WP_000836688 | hypothetical protein | - |
| RG28_RS28575 (RG28_27200) | 55170..55574 | - | 405 | WP_073521283 | hypothetical protein | - |
| RG28_RS28580 (RG28_27205) | 55571..55789 | - | 219 | WP_000556751 | hypothetical protein | - |
| RG28_RS28585 (RG28_27210) | 55868..56344 | - | 477 | WP_073521284 | hypothetical protein | - |
| RG28_RS28590 (RG28_27215) | 56337..56558 | - | 222 | WP_001756934 | conjugal transfer protein TraR | - |
| RG28_RS28595 (RG28_27220) | 56693..57208 | - | 516 | WP_073521285 | type IV conjugative transfer system lipoprotein TraV | traV |
| RG28_RS28600 (RG28_27225) | 57205..57456 | - | 252 | WP_073521286 | conjugal transfer protein TrbG | - |
| RG28_RS28605 (RG28_27230) | 57449..57769 | - | 321 | WP_001057291 | DUF2689 domain-containing protein | virb4 |
| RG28_RS28610 (RG28_27235) | 57756..58340 | - | 585 | WP_040089506 | conjugal transfer pilus-stabilizing protein TraP | - |
| RG28_RS28615 (RG28_27240) | 58351..59758 | - | 1408 | Protein_71 | F-type conjugal transfer pilus assembly protein TraB | - |
| RG28_RS28620 (RG28_27245) | 59758..60486 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| RG28_RS28625 (RG28_27250) | 60473..61039 | - | 567 | WP_000399797 | type IV conjugative transfer system protein TraE | traE |
| RG28_RS28630 (RG28_27255) | 61061..61372 | - | 312 | WP_000012125 | type IV conjugative transfer system protein TraL | traL |
| RG28_RS28635 (RG28_27260) | 61387..61746 | - | 360 | WP_019842731 | type IV conjugative transfer system pilin TraA | - |
| RG28_RS28640 (RG28_27265) | 61780..62007 | - | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| RG28_RS28645 (RG28_27270) | 62101..62787 | - | 687 | WP_073521287 | PAS domain-containing protein | - |
| RG28_RS28650 (RG28_27275) | 62974..63357 | - | 384 | WP_073521288 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| RG28_RS28655 (RG28_27280) | 63712..64281 | + | 570 | Protein_79 | transglycosylase SLT domain-containing protein | - |
| RG28_RS28660 (RG28_27285) | 64578..65399 | - | 822 | WP_001234447 | DUF932 domain-containing protein | - |
| RG28_RS28665 (RG28_27290) | 65508..65804 | - | 297 | WP_001272251 | hypothetical protein | - |
| RG28_RS28670 (RG28_27295) | 65828..66034 | - | 207 | WP_000547959 | hypothetical protein | - |