T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3534..17082
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS532_RS00005 (pMET1_001) | 674..1387 | - | 714 | WP_012457107 | RepA family replication protein | - |
| HS532_RS00010 (pMET1_002) | 1839..2198 | - | 360 | WP_012457108 | helix-turn-helix transcriptional regulator | - |
| HS532_RS00015 (pMET1_003) | 2451..2906 | + | 456 | WP_009309974 | transcription termination/antitermination NusG family protein | - |
| HS532_RS00020 | 2978..3193 | + | 216 | WP_004178170 | hypothetical protein | - |
| HS532_RS00025 | 3198..3416 | + | 219 | WP_032722781 | hypothetical protein | - |
| HS532_RS00245 | 3413..3535 | - | 123 | WP_255093128 | hypothetical protein | - |
| HS532_RS00030 (pMET1_004) | 3534..4244 | + | 711 | WP_004178175 | lytic transglycosylase domain-containing protein | virB1 |
| HS532_RS00035 (pMET1_005) | 4241..4546 | + | 306 | WP_012457109 | TrbC/VirB2 family protein | virB2 |
| HS532_RS00040 (pMET1_006) | 4559..7297 | + | 2739 | WP_012457110 | VirB3 family type IV secretion system protein | virb4 |
| HS532_RS00045 (pMET1_007) | 7316..8026 | + | 711 | WP_012457111 | type IV secretion system protein | - |
| HS532_RS00050 | 8036..8263 | + | 228 | WP_004178109 | EexN family lipoprotein | - |
| HS532_RS00055 (pMET1_008) | 8275..9351 | + | 1077 | WP_012457112 | type IV secretion system protein | virB6 |
| HS532_RS00060 (pMET1_010) | 9587..10255 | + | 669 | WP_264823599 | type IV secretion system protein | virB8 |
| HS532_RS00065 (pMET1_011) | 10252..11160 | + | 909 | WP_012457114 | P-type conjugative transfer protein VirB9 | virB9 |
| HS532_RS00070 (pMET1_012) | 11207..12475 | + | 1269 | WP_139968916 | VirB10/TraB/TrbI family type IV secretion system protein | virB10 |
| HS532_RS00075 (pMET1_013) | 12465..13490 | + | 1026 | WP_012457116 | P-type DNA transfer ATPase VirB11 | virB11 |
| HS532_RS00080 (pMET1_014) | 13487..13885 | + | 399 | WP_012457117 | cag pathogenicity island Cag12 family protein | - |
| HS532_RS00085 (pMET1_015) | 13921..14226 | + | 306 | WP_012457118 | hypothetical protein | - |
| HS532_RS00090 (pMET1_016) | 14260..14565 | + | 306 | WP_094309429 | dpoa decarboxylase | - |
| HS532_RS00095 (pMET1_017) | 15346..17082 | + | 1737 | WP_094309419 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| HS532_RS00100 (pMET1_018) | 17091..17846 | + | 756 | WP_023316386 | MobC family replication-relaxation protein | - |
| HS532_RS00105 (pMET1_019) | 17949..18479 | + | 531 | WP_012457122 | phospholipase D family protein | - |
| HS532_RS00110 (pMET1_020) | 18663..19631 | - | 969 | WP_012457123 | zincin-like metallopeptidase domain-containing protein | - |
| HS532_RS00235 | 20016..20351 | + | 336 | WP_012457124 | hypothetical protein | - |
| HS532_RS00240 | 20348..20680 | + | 333 | WP_012457125 | hypothetical protein | - |
| HS532_RS00120 | 20728..21000 | - | 273 | WP_172683482 | hypothetical protein | - |
| HS532_RS00125 (pMET1_023) | 21054..21353 | - | 300 | WP_012457126 | helix-turn-helix domain-containing protein | - |
| HS532_RS00130 (pMET1_024) | 21356..21706 | - | 351 | WP_012457127 | type II toxin-antitoxin system RelE/ParE family toxin | - |