T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 56918..82089
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTF20_RS00270 (pNDM1_EC14653_00058) | 52015..52338 | + | 324 | WP_008324183 | hypothetical protein | - |
| HTF20_RS00275 (pNDM1_EC14653_00059) | 52400..52759 | + | 360 | WP_015493069 | hypothetical protein | - |
| HTF20_RS00280 (pNDM1_EC14653_00060) | 53386..53760 | + | 375 | WP_008324180 | hypothetical protein | - |
| HTF20_RS00285 (pNDM1_EC14653_00061) | 53814..54101 | + | 288 | WP_008324178 | hypothetical protein | - |
| HTF20_RS00290 (pNDM1_EC14653_00062) | 54148..54492 | + | 345 | WP_008324177 | hypothetical protein | - |
| HTF20_RS00295 (pNDM1_EC14653_00063) | 54578..54841 | + | 264 | WP_008324174 | hypothetical protein | - |
| HTF20_RS00300 (pNDM1_EC14653_00064) | 54884..55714 | + | 831 | WP_008324171 | N-6 DNA methylase | - |
| HTF20_RS00305 (pNDM1_EC14653_00065) | 56341..56871 | + | 531 | WP_008324170 | antirestriction protein | - |
| HTF20_RS00310 (pNDM1_EC14653_00066) | 56918..57394 | - | 477 | WP_008324168 | transglycosylase SLT domain-containing protein | - |
| HTF20_RS00315 (pNDM1_EC14653_00067) | 57826..58218 | + | 393 | WP_008324167 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HTF20_RS00320 (pNDM1_EC14653_00068) | 58407..59096 | + | 690 | WP_008324166 | hypothetical protein | - |
| HTF20_RS00325 (pNDM1_EC14653_00069) | 59183..59407 | + | 225 | WP_008324165 | TraY domain-containing protein | - |
| HTF20_RS00330 (pNDM1_EC14653_00070) | 59465..59815 | + | 351 | WP_016247536 | type IV conjugative transfer system pilin TraA | - |
| HTF20_RS00335 (pNDM1_EC14653_00071) | 59966..60271 | + | 306 | WP_016479987 | type IV conjugative transfer system protein TraL | traL |
| HTF20_RS00340 (pNDM1_EC14653_00072) | 60286..60852 | + | 567 | WP_016247535 | type IV conjugative transfer system protein TraE | traE |
| HTF20_RS00345 (pNDM1_EC14653_00073) | 60839..61582 | + | 744 | WP_008324157 | type-F conjugative transfer system secretin TraK | traK |
| HTF20_RS00350 (pNDM1_EC14653_00074) | 61569..62963 | + | 1395 | WP_016479986 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HTF20_RS00355 (pNDM1_EC14653_00075) | 62985..63524 | + | 540 | WP_016247533 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTF20_RS00360 (pNDM1_EC14653_00076) | 63644..63868 | + | 225 | WP_008324141 | TraR/DksA C4-type zinc finger protein | - |
| HTF20_RS00365 (pNDM1_EC14653_00077) | 63872..64057 | + | 186 | WP_008324139 | hypothetical protein | - |
| HTF20_RS00370 (pNDM1_EC14653_00078) | 64041..64442 | + | 402 | WP_016479985 | hypothetical protein | - |
| HTF20_RS00375 (pNDM1_EC14653_00079) | 64432..64998 | + | 567 | WP_008324135 | conjugal transfer pilus-stabilizing protein TraP | - |
| HTF20_RS00380 (pNDM1_EC14653_00080) | 64991..67621 | + | 2631 | WP_008324134 | type IV secretion system protein TraC | virb4 |
| HTF20_RS00385 (pNDM1_EC14653_00081) | 67618..67965 | + | 348 | WP_008324133 | type-F conjugative transfer system protein TrbI | - |
| HTF20_RS00390 (pNDM1_EC14653_00082) | 67965..68612 | + | 648 | WP_008324132 | type-F conjugative transfer system protein TraW | traW |
| HTF20_RS00395 (pNDM1_EC14653_00083) | 68615..69601 | + | 987 | WP_042934586 | conjugal transfer pilus assembly protein TraU | traU |
| HTF20_RS00400 (pNDM1_EC14653_00084) | 69618..70247 | + | 630 | WP_008324130 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HTF20_RS00405 (pNDM1_EC14653_00085) | 70244..72097 | + | 1854 | WP_016479983 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HTF20_RS00410 (pNDM1_EC14653_00086) | 72129..72317 | + | 189 | WP_008324128 | conjugal transfer protein TrbE | - |
| HTF20_RS00415 (pNDM1_EC14653_00087) | 72348..73097 | + | 750 | WP_008324127 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HTF20_RS00420 (pNDM1_EC14653_00088) | 73114..73362 | + | 249 | WP_016479982 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HTF20_RS00425 (pNDM1_EC14653_00089) | 73352..73906 | + | 555 | WP_008324125 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HTF20_RS00430 (pNDM1_EC14653_00090) | 73899..74327 | + | 429 | WP_008324122 | hypothetical protein | - |
| HTF20_RS00435 (pNDM1_EC14653_00091) | 74314..75684 | + | 1371 | WP_016247527 | conjugal transfer pilus assembly protein TraH | traH |
| HTF20_RS00440 (pNDM1_EC14653_00092) | 75684..78506 | + | 2823 | WP_008324119 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HTF20_RS00445 (pNDM1_EC14653_00093) | 78528..78959 | + | 432 | WP_008324118 | entry exclusion protein | - |
| HTF20_RS00615 (pNDM1_EC14653_00094) | 79034..79372 | + | 339 | WP_032072912 | tetratricopeptide repeat protein | - |
| HTF20_RS00620 (pNDM1_EC14653_00095) | 79380..79709 | + | 330 | WP_223856629 | hypothetical protein | - |
| HTF20_RS00455 (pNDM1_EC14653_00096) | 79843..82089 | + | 2247 | WP_016479979 | type IV conjugative transfer system coupling protein TraD | virb4 |