T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 74312..103157
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LY628_RS00440 (tmp_000088) | 70319..70675 | + | 357 | WP_019706019 | hypothetical protein | - |
| LY628_RS00445 (tmp_000089) | 70736..70948 | + | 213 | WP_019706020 | hypothetical protein | - |
| LY628_RS00450 (tmp_000090) | 70959..71183 | + | 225 | WP_087652801 | hypothetical protein | - |
| LY628_RS00455 (tmp_000091) | 71264..71584 | + | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LY628_RS00460 (tmp_000092) | 71574..71852 | + | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| LY628_RS00465 (tmp_000093) | 71853..72266 | + | 414 | WP_020316683 | helix-turn-helix domain-containing protein | - |
| LY628_RS00470 (tmp_000094) | 73096..73917 | + | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| LY628_RS00475 (tmp_000095) | 73950..74279 | + | 330 | WP_011977736 | DUF5983 family protein | - |
| LY628_RS00480 (tmp_000096) | 74312..74797 | - | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| LY628_RS00485 (tmp_000097) | 75188..75604 | + | 417 | WP_014343494 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LY628_RS00490 (tmp_000098) | 75804..76523 | + | 720 | WP_164979613 | conjugal transfer protein TrbJ | - |
| LY628_RS00495 (tmp_000099) | 76656..76862 | + | 207 | WP_171773970 | TraY domain-containing protein | - |
| LY628_RS00500 (tmp_000100) | 76924..77292 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LY628_RS00505 (tmp_000101) | 77306..77611 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LY628_RS00510 (tmp_000102) | 77631..78197 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| LY628_RS00515 (tmp_000103) | 78184..78924 | + | 741 | WP_117087731 | type-F conjugative transfer system secretin TraK | traK |
| LY628_RS00520 (tmp_000104) | 78924..80348 | + | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LY628_RS00525 (tmp_000105) | 80421..81005 | + | 585 | WP_032440547 | type IV conjugative transfer system lipoprotein TraV | traV |
| LY628_RS00530 (tmp_000106) | 81328..81546 | + | 219 | WP_004195468 | hypothetical protein | - |
| LY628_RS00535 (tmp_000107) | 81547..81858 | + | 312 | WP_117087732 | hypothetical protein | - |
| LY628_RS00540 (tmp_000108) | 81925..82329 | + | 405 | WP_114507349 | hypothetical protein | - |
| LY628_RS00545 (tmp_000109) | 82454..82699 | + | 246 | WP_087652776 | hypothetical protein | - |
| LY628_RS00550 (tmp_000110) | 82707..83105 | + | 399 | WP_164979614 | hypothetical protein | - |
| LY628_RS00555 (tmp_000111) | 83177..85816 | + | 2640 | WP_064169022 | type IV secretion system protein TraC | virb4 |
| LY628_RS00560 (tmp_000112) | 85816..86205 | + | 390 | WP_040107933 | type-F conjugative transfer system protein TrbI | - |
| LY628_RS00565 (tmp_000113) | 86205..86840 | + | 636 | WP_085551873 | type-F conjugative transfer system protein TraW | traW |
| LY628_RS00570 (tmp_000114) | 86875..87276 | + | 402 | WP_044265012 | hypothetical protein | - |
| LY628_RS00575 (tmp_000115) | 87273..88262 | + | 990 | WP_046664201 | conjugal transfer pilus assembly protein TraU | traU |
| LY628_RS00580 (tmp_000116) | 88283..88459 | + | 177 | WP_162866177 | hypothetical protein | - |
| LY628_RS00585 (tmp_000117) | 88538..89185 | + | 648 | WP_114507347 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LY628_RS00590 (tmp_000118) | 89244..91199 | + | 1956 | WP_117061680 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LY628_RS00595 (tmp_000119) | 91231..91485 | + | 255 | WP_073558194 | conjugal transfer protein TrbE | - |
| LY628_RS00600 (tmp_000120) | 91463..91711 | + | 249 | WP_004152675 | hypothetical protein | - |
| LY628_RS00605 (tmp_000121) | 91724..92050 | + | 327 | WP_023284640 | hypothetical protein | - |
| LY628_RS00610 (tmp_000122) | 92071..92823 | + | 753 | WP_032441888 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LY628_RS00615 (tmp_000123) | 92834..93073 | + | 240 | WP_009309875 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LY628_RS00620 (tmp_000124) | 93045..93602 | + | 558 | WP_032441889 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LY628_RS00625 (tmp_000125) | 93648..94091 | + | 444 | WP_244557386 | F-type conjugal transfer protein TrbF | - |
| LY628_RS00630 (tmp_000126) | 94069..95448 | + | 1380 | WP_164979616 | conjugal transfer pilus assembly protein TraH | traH |
| LY628_RS00635 (tmp_000127) | 95448..98291 | + | 2844 | WP_064291680 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LY628_RS00640 (tmp_000128) | 98302..98826 | + | 525 | WP_116440826 | hypothetical protein | - |
| LY628_RS00645 (tmp_000129) | 99135..99866 | + | 732 | WP_013023830 | conjugal transfer complement resistance protein TraT | - |
| LY628_RS00650 (tmp_000130) | 100059..100748 | + | 690 | WP_014343485 | hypothetical protein | - |
| LY628_RS00655 (tmp_000131) | 100875..103157 | + | 2283 | WP_110133658 | type IV conjugative transfer system coupling protein TraD | virb4 |