T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2660..27750
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL130_RS00010 (KCOLMDFC_00001) | 170..859 | - | 690 | WP_013023831 | hypothetical protein | - |
| LL130_RS00015 (KCOLMDFC_00002) | 1052..1783 | - | 732 | WP_016831056 | conjugal transfer complement resistance protein TraT | - |
| LL130_RS00020 (KCOLMDFC_00003) | 2035..2637 | - | 603 | WP_013214035 | conjugal transfer protein TraS | - |
| LL130_RS00025 (KCOLMDFC_00004) | 2660..5482 | - | 2823 | WP_013214034 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LL130_RS00030 (KCOLMDFC_00005) | 5482..6861 | - | 1380 | WP_074160414 | conjugal transfer pilus assembly protein TraH | traH |
| LL130_RS00035 (KCOLMDFC_00006) | 6839..7282 | - | 444 | WP_013214032 | F-type conjugal transfer protein TrbF | - |
| LL130_RS00040 (KCOLMDFC_00007) | 7328..7885 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LL130_RS00045 (KCOLMDFC_00008) | 7857..8096 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LL130_RS00050 (KCOLMDFC_00009) | 8107..8859 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LL130_RS00055 (KCOLMDFC_00010) | 8880..9206 | - | 327 | WP_004152676 | hypothetical protein | - |
| LL130_RS00060 (KCOLMDFC_00011) | 9219..9467 | - | 249 | WP_013214029 | hypothetical protein | - |
| LL130_RS00065 (KCOLMDFC_00012) | 9445..9699 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| LL130_RS00070 (KCOLMDFC_00013) | 9731..11686 | - | 1956 | WP_032448279 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LL130_RS00075 (KCOLMDFC_00014) | 11745..12392 | - | 648 | WP_163622408 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LL130_RS00080 (KCOLMDFC_00017) | 12668..13657 | - | 990 | WP_032439620 | conjugal transfer pilus assembly protein TraU | traU |
| LL130_RS00085 (KCOLMDFC_00018) | 13654..14055 | - | 402 | WP_016831047 | hypothetical protein | - |
| LL130_RS00090 (KCOLMDFC_00019) | 14090..14725 | - | 636 | WP_020325113 | type-F conjugative transfer system protein TraW | traW |
| LL130_RS00095 (KCOLMDFC_00020) | 14725..15114 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| LL130_RS00100 (KCOLMDFC_00021) | 15114..17753 | - | 2640 | WP_032448278 | type IV secretion system protein TraC | virb4 |
| LL130_RS00105 (KCOLMDFC_00022) | 17825..18223 | - | 399 | WP_023158008 | hypothetical protein | - |
| LL130_RS00110 (KCOLMDFC_00023) | 18231..18620 | - | 390 | WP_065799586 | hypothetical protein | - |
| LL130_RS00115 (KCOLMDFC_00024) | 18663..19067 | - | 405 | WP_016831042 | hypothetical protein | - |
| LL130_RS00120 (KCOLMDFC_00025) | 19134..19446 | - | 313 | Protein_23 | hypothetical protein | - |
| LL130_RS00125 (KCOLMDFC_00026) | 19447..19665 | - | 219 | WP_014386199 | hypothetical protein | - |
| LL130_RS00130 (KCOLMDFC_00027) | 19689..19979 | - | 291 | WP_065799585 | hypothetical protein | - |
| LL130_RS00135 | 19984..20394 | - | 411 | WP_014386197 | hypothetical protein | - |
| LL130_RS00140 (KCOLMDFC_00028) | 20525..21109 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| LL130_RS00145 (KCOLMDFC_00029) | 21156..21728 | - | 573 | WP_014386195 | conjugal transfer pilus-stabilizing protein TraP | - |
| LL130_RS00150 (KCOLMDFC_00030) | 21721..23145 | - | 1425 | WP_014386194 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LL130_RS00155 (KCOLMDFC_00031) | 23145..23885 | - | 741 | WP_014386193 | type-F conjugative transfer system secretin TraK | traK |
| LL130_RS00160 (KCOLMDFC_00032) | 23872..24438 | - | 567 | WP_004152602 | type IV conjugative transfer system protein TraE | traE |
| LL130_RS00165 (KCOLMDFC_00033) | 24458..24763 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LL130_RS00170 (KCOLMDFC_00034) | 24777..25145 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LL130_RS00175 | 25207..25413 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| LL130_RS00180 (KCOLMDFC_00035) | 25546..26265 | - | 720 | WP_014386192 | conjugal transfer protein | - |
| LL130_RS00185 (KCOLMDFC_00036) | 26458..26874 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LL130_RS00190 (KCOLMDFC_00037) | 27265..27750 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| LL130_RS00195 (KCOLMDFC_00038) | 27783..28112 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| LL130_RS00200 (KCOLMDFC_00039) | 28145..28966 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| LL130_RS00205 (KCOLMDFC_00040) | 29799..30212 | - | 414 | WP_013023817 | helix-turn-helix domain-containing protein | - |
| LL130_RS00210 (KCOLMDFC_00041) | 30213..30491 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| LL130_RS00215 (KCOLMDFC_00042) | 30481..30801 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LL130_RS00220 (KCOLMDFC_00043) | 30882..31106 | - | 225 | WP_014386189 | hypothetical protein | - |
| LL130_RS00225 (KCOLMDFC_00044) | 31117..31329 | - | 213 | WP_014386188 | hypothetical protein | - |
| LL130_RS00230 (KCOLMDFC_00045) | 31391..31717 | - | 327 | WP_014386187 | hypothetical protein | - |