T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 67502..93161
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LI75_RS24545 (LI75_24550) | 63054..63341 | + | 288 | WP_000107520 | hypothetical protein | - |
| LI75_RS24550 (LI75_24555) | 63460..64281 | + | 822 | WP_001234468 | DUF932 domain-containing protein | - |
| LI75_RS24555 (LI75_24560) | 64577..65179 | - | 603 | Protein_67 | transglycosylase SLT domain-containing protein | - |
| LI75_RS24560 (LI75_24565) | 65510..65893 | + | 384 | WP_001151562 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LI75_RS24565 (LI75_24570) | 66087..66773 | + | 687 | WP_000332500 | PAS domain-containing protein | - |
| LI75_RS24570 (LI75_24575) | 66867..67094 | + | 228 | WP_001254388 | conjugal transfer relaxosome protein TraY | - |
| LI75_RS24575 (LI75_24580) | 67128..67487 | + | 360 | WP_001098994 | type IV conjugative transfer system pilin TraA | - |
| LI75_RS24580 (LI75_24585) | 67502..67813 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| LI75_RS24585 (LI75_24590) | 67835..68401 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| LI75_RS24590 (LI75_24595) | 68388..69116 | + | 729 | WP_001230771 | type-F conjugative transfer system secretin TraK | traK |
| LI75_RS24595 (LI75_24600) | 69116..70543 | + | 1428 | WP_001530447 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LI75_RS24600 (LI75_24605) | 70533..71123 | + | 591 | WP_000002782 | conjugal transfer pilus-stabilizing protein TraP | - |
| LI75_RS24605 (LI75_24610) | 71110..71431 | + | 322 | Protein_77 | conjugal transfer protein TrbD | - |
| LI75_RS24610 (LI75_24615) | 71424..71675 | + | 252 | WP_001061854 | conjugal transfer protein TrbG | - |
| LI75_RS24615 (LI75_24620) | 71672..72188 | + | 517 | Protein_79 | type IV conjugative transfer system lipoprotein TraV | - |
| LI75_RS28390 (LI75_24625) | 72323..72544 | + | 222 | WP_038431837 | conjugal transfer protein TraR | - |
| LI75_RS24625 (LI75_24630) | 72537..73014 | + | 478 | Protein_81 | hypothetical protein | - |
| LI75_RS31270 (LI75_24635) | 73094..73311 | + | 218 | Protein_82 | hypothetical protein | - |
| LI75_RS30270 (LI75_24640) | 73339..73686 | + | 348 | WP_000836682 | hypothetical protein | - |
| LI75_RS24640 (LI75_24645) | 73812..76442 | + | 2631 | WP_025653530 | type IV secretion system protein TraC | virb4 |
| LI75_RS24645 (LI75_24650) | 76439..76825 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| LI75_RS24650 (LI75_24655) | 76822..77454 | + | 633 | WP_025653531 | type-F conjugative transfer system protein TraW | traW |
| LI75_RS24655 (LI75_24660) | 77451..78443 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| LI75_RS24660 (LI75_24665) | 78473..78775 | + | 303 | WP_025653532 | hypothetical protein | - |
| LI75_RS24665 (LI75_24670) | 78787..79425 | + | 639 | WP_025653533 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LI75_RS24670 (LI75_24675) | 79422..81272 | + | 1851 | WP_025653534 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LI75_RS24675 (LI75_24680) | 81299..81556 | + | 258 | WP_000864329 | conjugal transfer protein TrbE | - |
| LI75_RS24680 (LI75_24685) | 81549..82294 | + | 746 | Protein_92 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LI75_RS24685 (LI75_24690) | 82308..82649 | + | 342 | WP_000556795 | conjugal transfer protein TrbA | - |
| LI75_RS30940 | 82780..82965 | - | 186 | WP_000736411 | hypothetical protein | - |
| LI75_RS24695 (LI75_24700) | 83046..83330 | + | 285 | WP_038431841 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LI75_RS24700 (LI75_24705) | 83317..83862 | + | 546 | WP_000059830 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LI75_RS24705 (LI75_24710) | 83792..84139 | + | 348 | WP_001309242 | P-type conjugative transfer protein TrbJ | - |
| LI75_RS24710 (LI75_24715) | 84120..84512 | + | 393 | WP_025653535 | F-type conjugal transfer protein TrbF | - |
| LI75_RS24715 (LI75_24720) | 84499..85872 | + | 1374 | WP_000944331 | conjugal transfer pilus assembly protein TraH | traH |
| LI75_RS24720 (LI75_24725) | 85869..88691 | + | 2823 | WP_021532807 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LI75_RS24725 (LI75_24730) | 88706..89209 | + | 504 | WP_077696861 | surface exclusion protein | - |
| LI75_RS24730 (LI75_24735) | 89241..89972 | + | 732 | WP_024187483 | conjugal transfer complement resistance protein TraT | - |
| LI75_RS24735 (LI75_24740) | 90175..90912 | + | 738 | WP_021515410 | hypothetical protein | - |
| LI75_RS24740 (LI75_24745) | 90963..93161 | + | 2199 | WP_025667836 | type IV conjugative transfer system coupling protein TraD | virb4 |