T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 58739..84367
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
CY43_RS27615 | 54015..54157 | - | 143 | Protein_72 | hypothetical protein | - |
CY43_RS24345 | 54484..54807 | + | 324 | Protein_73 | single-stranded DNA-binding protein SSB2 | - |
CY43_RS24350 (CY43_24335) | 54810..55892 | + | 1083 | Protein_74 | chromosome partitioning protein ParB | - |
CY43_RS24355 (CY43_24340) | 55932..56366 | + | 435 | WP_010999943 | conjugation system SOS inhibitor PsiB | - |
CY43_RS24360 (CY43_24345) | 56363..57100 | + | 738 | WP_000581933 | plasmid SOS inhibition protein A | - |
CY43_RS27525 | 57135..57263 | + | 129 | WP_000372429 | hypothetical protein | - |
CY43_RS27200 | 57349..57507 | + | 159 | WP_001704449 | hypothetical protein | - |
CY43_RS27205 | 57610..58428 | + | 819 | Protein_79 | DUF932 domain-containing protein | - |
CY43_RS24375 (CY43_24370) | 58739..59209 | - | 471 | WP_001526856 | transglycosylase SLT domain-containing protein | virB1 |
CY43_RS24380 (CY43_24375) | 59624..60004 | + | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
CY43_RS24385 (CY43_24380) | 60197..60883 | + | 687 | WP_000336297 | PAS domain-containing protein | - |
CY43_RS26260 | 60978..61205 | + | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
CY43_RS24390 (CY43_24385) | 61247..61609 | + | 363 | WP_001274201 | type IV conjugative transfer system pilin TraA | - |
CY43_RS24395 (CY43_24390) | 61624..61935 | + | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
CY43_RS24400 (CY43_24395) | 61957..62523 | + | 567 | WP_000399768 | type IV conjugative transfer system protein TraE | traE |
CY43_RS24405 (CY43_24400) | 62510..63250 | + | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
CY43_RS24410 (CY43_24405) | 63250..64671 | + | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
CY43_RS24415 (CY43_24410) | 64661..65257 | + | 597 | WP_000527896 | conjugal transfer pilus-stabilizing protein TraP | - |
CY43_RS24420 (CY43_24415) | 65235..65480 | + | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
CY43_RS24425 (CY43_24420) | 65477..65992 | + | 516 | WP_001079995 | type IV conjugative transfer system lipoprotein TraV | traV |
CY43_RS24430 (CY43_24425) | 66127..66348 | + | 222 | WP_001278699 | conjugal transfer protein TraR | - |
CY43_RS24435 (CY43_24430) | 66341..66808 | + | 468 | WP_000549562 | hypothetical protein | - |
CY43_RS24440 (CY43_24440) | 66925..67188 | + | 264 | WP_001239256 | hypothetical protein | - |
CY43_RS24445 (CY43_24445) | 67204..69024 | + | 1821 | WP_040122033 | TraC family protein | virb4 |
CY43_RS24450 (CY43_24450) | 68999..69385 | + | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
CY43_RS24455 (CY43_24455) | 69382..70014 | + | 633 | WP_000871995 | type-F conjugative transfer system protein TraW | traW |
CY43_RS24460 (CY43_24460) | 70011..71003 | + | 993 | WP_000833320 | conjugal transfer pilus assembly protein TraU | traU |
CY43_RS24465 (CY43_24465) | 71022..71330 | + | 309 | WP_010999945 | hypothetical protein | - |
CY43_RS24470 (CY43_24470) | 71315..71953 | + | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
CY43_RS24475 (CY43_24475) | 71990..72409 | + | 420 | WP_001229397 | HNH endonuclease signature motif containing protein | - |
CY43_RS24480 (CY43_24480) | 72406..74232 | + | 1827 | WP_000827528 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
CY43_RS24485 (CY43_24485) | 74243..74458 | + | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
CY43_RS24490 (CY43_24490) | 74470..75219 | + | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
CY43_RS24495 (CY43_24495) | 75433..75726 | + | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
CY43_RS24500 (CY43_24500) | 75713..76261 | + | 549 | WP_022743183 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
CY43_RS24505 (CY43_24505) | 76251..77633 | + | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
CY43_RS24510 (CY43_24510) | 77630..80452 | + | 2823 | WP_031603544 | conjugal transfer mating-pair stabilization protein TraG | traG |
CY43_RS24515 (CY43_24515) | 80468..80962 | + | 495 | WP_010999946 | entry exclusion protein | - |
CY43_RS24520 (CY43_24520) | 80998..81729 | + | 732 | WP_022743186 | conjugal transfer complement resistance protein TraT | - |
CY43_RS24525 (CY43_24525) | 82106..84367 | + | 2262 | WP_022743189 | type IV conjugative transfer system coupling protein TraD | prgC |
CY43_RS24530 (CY43_24530) | 84376..84774 | - | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
CY43_RS24535 (CY43_24535) | 84774..85001 | - | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |