T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 56917..82097
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS632_RS00270 (pNDM1_EClY2402_00058) | 52014..52337 | + | 324 | WP_008324183 | hypothetical protein | - |
| BS632_RS00275 (pNDM1_EClY2402_00059) | 52399..52758 | + | 360 | WP_015493069 | hypothetical protein | - |
| BS632_RS00280 (pNDM1_EClY2402_00060) | 53385..53759 | + | 375 | WP_008324180 | hypothetical protein | - |
| BS632_RS00285 (pNDM1_EClY2402_00061) | 53813..54100 | + | 288 | WP_008324178 | hypothetical protein | - |
| BS632_RS00290 (pNDM1_EClY2402_00062) | 54147..54491 | + | 345 | WP_008324177 | hypothetical protein | - |
| BS632_RS00295 (pNDM1_EClY2402_00063) | 54577..54840 | + | 264 | WP_008324174 | hypothetical protein | - |
| BS632_RS00300 (pNDM1_EClY2402_00064) | 54883..55713 | + | 831 | WP_008324171 | N-6 DNA methylase | - |
| BS632_RS00305 (pNDM1_EClY2402_00066) | 56340..56870 | + | 531 | WP_008324170 | antirestriction protein | - |
| BS632_RS00310 (pNDM1_EClY2402_00067) | 56917..57393 | - | 477 | WP_008324168 | transglycosylase SLT domain-containing protein | - |
| BS632_RS00315 (pNDM1_EClY2402_00068) | 57825..58217 | + | 393 | WP_008324167 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| BS632_RS00320 (pNDM1_EClY2402_00069) | 58406..59095 | + | 690 | WP_008324166 | hypothetical protein | - |
| BS632_RS00325 (pNDM1_EClY2402_00070) | 59182..59406 | + | 225 | WP_008324165 | TraY domain-containing protein | - |
| BS632_RS00330 (pNDM1_EClY2402_00071) | 59464..59814 | + | 351 | WP_016247536 | type IV conjugative transfer system pilin TraA | - |
| BS632_RS00335 (pNDM1_EClY2402_00072) | 59965..60270 | + | 306 | WP_016479987 | type IV conjugative transfer system protein TraL | traL |
| BS632_RS00340 (pNDM1_EClY2402_00073) | 60285..60851 | + | 567 | WP_016247535 | type IV conjugative transfer system protein TraE | traE |
| BS632_RS00345 (pNDM1_EClY2402_00074) | 60838..61581 | + | 744 | WP_008324157 | type-F conjugative transfer system secretin TraK | traK |
| BS632_RS00350 (pNDM1_EClY2402_00075) | 61568..62962 | + | 1395 | WP_016479986 | F-type conjugal transfer pilus assembly protein TraB | traB |
| BS632_RS00355 (pNDM1_EClY2402_00076) | 62984..63523 | + | 540 | WP_016247533 | type IV conjugative transfer system lipoprotein TraV | traV |
| BS632_RS00360 (pNDM1_EClY2402_00077) | 63643..63867 | + | 225 | WP_008324141 | TraR/DksA C4-type zinc finger protein | - |
| BS632_RS00365 (pNDM1_EClY2402_00078) | 63871..64056 | + | 186 | WP_008324139 | hypothetical protein | - |
| BS632_RS00370 (pNDM1_EClY2402_00079) | 64040..64441 | + | 402 | WP_016479985 | hypothetical protein | - |
| BS632_RS00375 (pNDM1_EClY2402_00080) | 64431..64997 | + | 567 | WP_008324135 | conjugal transfer pilus-stabilizing protein TraP | - |
| BS632_RS00380 (pNDM1_EClY2402_00081) | 64990..67620 | + | 2631 | WP_008324134 | type IV secretion system protein TraC | virb4 |
| BS632_RS00385 (pNDM1_EClY2402_00082) | 67617..67964 | + | 348 | WP_008324133 | type-F conjugative transfer system protein TrbI | - |
| BS632_RS00390 (pNDM1_EClY2402_00083) | 67964..68611 | + | 648 | WP_008324132 | type-F conjugative transfer system protein TraW | traW |
| BS632_RS00395 (pNDM1_EClY2402_00084) | 68614..69600 | + | 987 | WP_042934586 | conjugal transfer pilus assembly protein TraU | traU |
| BS632_RS00400 (pNDM1_EClY2402_00085) | 69617..70246 | + | 630 | WP_008324130 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| BS632_RS00405 (pNDM1_EClY2402_00086) | 70243..72096 | + | 1854 | WP_016479983 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| BS632_RS00410 (pNDM1_EClY2402_00087) | 72128..72316 | + | 189 | WP_008324128 | conjugal transfer protein TrbE | - |
| BS632_RS00415 (pNDM1_EClY2402_00088) | 72347..73096 | + | 750 | WP_008324127 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| BS632_RS00420 (pNDM1_EClY2402_00089) | 73113..73361 | + | 249 | WP_016479982 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BS632_RS00425 (pNDM1_EClY2402_00090) | 73351..73905 | + | 555 | WP_008324125 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| BS632_RS00430 (pNDM1_EClY2402_00091) | 73898..74326 | + | 429 | WP_008324122 | hypothetical protein | - |
| BS632_RS00435 (pNDM1_EClY2402_00092) | 74313..75683 | + | 1371 | WP_016247527 | conjugal transfer pilus assembly protein TraH | traH |
| BS632_RS00440 (pNDM1_EClY2402_00093) | 75683..78505 | + | 2823 | WP_008324119 | conjugal transfer mating-pair stabilization protein TraG | traG |
| BS632_RS00445 (pNDM1_EClY2402_00094) | 78527..78958 | + | 432 | WP_008324118 | entry exclusion protein | - |
| BS632_RS00615 (pNDM1_EClY2402_00095) | 79051..79371 | + | 321 | WP_227543090 | tetratricopeptide repeat protein | - |
| BS632_RS00620 (pNDM1_EClY2402_00096) | 79379..79708 | + | 330 | WP_223856629 | hypothetical protein | - |
| BS632_RS00455 (pNDM1_EClY2402_00097) | 79842..82097 | + | 2256 | WP_075621255 | type IV conjugative transfer system coupling protein TraD | virb4 |