T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 90363..116893
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFNIH1_RS24930 (CFNIH1_25335) | 86388..86621 | - | 234 | WP_001191892 | hypothetical protein | - |
| CFNIH1_RS24935 (CFNIH1_25340) | 86603..87220 | - | 618 | WP_001249396 | hypothetical protein | - |
| CFNIH1_RS24940 (CFNIH1_25345) | 87388..90366 | + | 2979 | WP_001337757 | MobH family relaxase | - |
| CFNIH1_RS24945 (CFNIH1_25350) | 90363..92228 | + | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| CFNIH1_RS24950 (CFNIH1_25355) | 92278..92823 | + | 546 | WP_000228720 | hypothetical protein | - |
| CFNIH1_RS24955 (CFNIH1_25360) | 92780..93409 | + | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| CFNIH1_RS24960 (CFNIH1_25365) | 93419..93865 | + | 447 | WP_000122506 | hypothetical protein | - |
| CFNIH1_RS24965 (CFNIH1_25370) | 93875..94054 | + | 180 | WP_041445762 | hypothetical protein | - |
| CFNIH1_RS24975 (CFNIH1_25380) | 94143..95347 | + | 1205 | WP_086008128 | IS3 family transposase | - |
| CFNIH1_RS24980 (CFNIH1_25385) | 95426..95590 | + | 165 | WP_230592331 | hypothetical protein | - |
| CFNIH1_RS24985 (CFNIH1_25390) | 95590..96252 | + | 663 | WP_001231463 | hypothetical protein | - |
| CFNIH1_RS28285 | 96433..96576 | + | 144 | WP_001275801 | hypothetical protein | - |
| CFNIH1_RS24990 (CFNIH1_25395) | 96588..96953 | + | 366 | WP_001052531 | hypothetical protein | - |
| CFNIH1_RS24995 (CFNIH1_25400) | 97098..97379 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| CFNIH1_RS25000 (CFNIH1_25405) | 97376..98002 | + | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| CFNIH1_RS25005 (CFNIH1_25410) | 97986..98903 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| CFNIH1_RS25010 (CFNIH1_25415) | 98903..100216 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| CFNIH1_RS25015 (CFNIH1_25420) | 100213..100791 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| CFNIH1_RS25020 (CFNIH1_25425) | 100795..101187 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| CFNIH1_RS25025 (CFNIH1_25430) | 101388..106919 | + | 5532 | WP_000606833 | Ig-like domain-containing protein | - |
| CFNIH1_RS25030 (CFNIH1_25435) | 107069..107776 | + | 708 | WP_001259347 | DsbC family protein | - |
| CFNIH1_RS25035 (CFNIH1_25440) | 107773..110220 | + | 2448 | WP_000637386 | type IV secretion system protein TraC | virb4 |
| CFNIH1_RS25040 (CFNIH1_25445) | 110235..110552 | + | 318 | WP_000351984 | hypothetical protein | - |
| CFNIH1_RS25045 (CFNIH1_25450) | 110549..111079 | + | 531 | WP_001010738 | S26 family signal peptidase | - |
| CFNIH1_RS25050 (CFNIH1_25455) | 111042..112307 | + | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| CFNIH1_RS25055 (CFNIH1_25460) | 112304..112975 | + | 672 | WP_001337754 | EAL domain-containing protein | - |
| CFNIH1_RS25060 (CFNIH1_25465) | 112975..113979 | + | 1005 | WP_043940352 | TraU family protein | traU |
| CFNIH1_RS25065 (CFNIH1_25470) | 114095..116893 | + | 2799 | WP_001256487 | conjugal transfer mating pair stabilization protein TraN | traN |
| CFNIH1_RS25070 (CFNIH1_25475) | 116932..117792 | - | 861 | WP_041445776 | hypothetical protein | - |
| CFNIH1_RS25075 (CFNIH1_25480) | 117915..118556 | - | 642 | WP_000796664 | hypothetical protein | - |
| CFNIH1_RS25080 (CFNIH1_25485) | 118850..119170 | + | 321 | WP_000547566 | hypothetical protein | - |
| CFNIH1_RS25085 (CFNIH1_25490) | 119474..119659 | + | 186 | WP_001186917 | hypothetical protein | - |
| CFNIH1_RS25090 (CFNIH1_25495) | 119879..120847 | + | 969 | WP_000085162 | AAA family ATPase | - |
| CFNIH1_RS25095 (CFNIH1_25500) | 120858..121766 | + | 909 | WP_000739139 | hypothetical protein | - |