T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2395..13072
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTC88_RS00005 (pA22732_00001) | 1..1221 | - | 1221 | WP_011114072 | plasmid replication initiator TrfA | - |
| HTC88_RS00010 (pA22732_00002) | 1268..1609 | - | 342 | WP_000019167 | single-stranded DNA-binding protein | - |
| HTC88_RS00015 (pA22732_00003) | 1723..2085 | + | 363 | WP_010890126 | transcriptional regulator | - |
| HTC88_RS00020 (pA22732_00004) | 2395..3357 | + | 963 | WP_000132020 | P-type conjugative transfer ATPase TrbB | virB11 |
| HTC88_RS00025 (pA22732_00005) | 3374..3838 | + | 465 | WP_011114046 | conjugal transfer system pilin TrbC | virB2 |
| HTC88_RS00030 (pA22732_00006) | 3842..4153 | + | 312 | WP_001207961 | conjugal transfer protein TrbD | virB3 |
| HTC88_RS00035 (pA22732_00007) | 4150..6708 | + | 2559 | WP_011114047 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HTC88_RS00040 (pA22732_00008) | 6705..7487 | + | 783 | WP_006122481 | conjugal transfer protein TrbF | virB8 |
| HTC88_RS00045 (pA22732_00009) | 7505..8404 | + | 900 | WP_006122480 | P-type conjugative transfer protein TrbG | virB9 |
| HTC88_RS00050 (pA22732_00010) | 8407..8895 | + | 489 | WP_006122479 | conjugal transfer protein TrbH | - |
| HTC88_RS00055 (pA22732_00011) | 8900..10321 | + | 1422 | WP_011114050 | TrbI/VirB10 family protein | virB10 |
| HTC88_RS00060 (pA22732_00012) | 10342..11106 | + | 765 | WP_010890135 | P-type conjugative transfer protein TrbJ | virB5 |
| HTC88_RS00065 (pA22732_00013) | 11116..11343 | + | 228 | WP_000644148 | entry exclusion lipoprotein TrbK | - |
| HTC88_RS00070 (pA22732_00014) | 11354..13072 | + | 1719 | WP_027814021 | P-type conjugative transfer protein TrbL | virB6 |
| HTC88_RS00075 (pA22732_00015) | 13090..13677 | + | 588 | WP_010890138 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HTC88_RS00080 (pA22732_00016) | 13691..14326 | + | 636 | WP_011114052 | transglycosylase SLT domain-containing protein | - |
| HTC88_RS00085 (pA22732_00017) | 14355..14621 | + | 267 | WP_172685950 | conjugal transfer protein TrbO | - |
| HTC88_RS00090 (pA22732_00018) | 14621..15319 | + | 699 | WP_011114053 | TraX family protein | - |
| HTC88_RS00095 (pA22732_00019) | 15335..15766 | + | 432 | WP_001665065 | OmpA family protein | - |
| HTC88_RS00100 (pA22732_00020) | 15921..16595 | + | 675 | WP_011178411 | DNA methylase | - |
| HTC88_RS00105 (pA22732_00021) | 16597..17448 | - | 852 | WP_011296189 | recombinase family protein | - |
| HTC88_RS00110 | 17491..17562 | + | 72 | Protein_21 | EAL domain-containing protein | - |
| HTC88_RS00115 (pA22732_00022) | 17637..18065 | + | 429 | Protein_22 | helix-turn-helix domain-containing protein | - |