T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 205265..234477
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY38_RS22645 (NBY38_22645) | 205265..207547 | - | 2283 | WP_048255491 | type IV conjugative transfer system coupling protein TraD | virb4 |
| NBY38_RS22650 (NBY38_22650) | 207905..208636 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| NBY38_RS22655 (NBY38_22655) | 208826..209353 | - | 528 | WP_029498351 | conjugal transfer protein TraS | - |
| NBY38_RS22660 (NBY38_22660) | 209359..212208 | - | 2850 | WP_023329044 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NBY38_RS22665 (NBY38_22665) | 212208..213587 | - | 1380 | WP_023158000 | conjugal transfer pilus assembly protein TraH | traH |
| NBY38_RS22670 (NBY38_22670) | 213565..214008 | - | 444 | WP_023158001 | F-type conjugal transfer protein TrbF | - |
| NBY38_RS22675 (NBY38_22675) | 214054..214611 | - | 558 | WP_023158002 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NBY38_RS22680 (NBY38_22680) | 214583..214822 | - | 240 | WP_048255490 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NBY38_RS22685 (NBY38_22685) | 214833..215585 | - | 753 | WP_015632513 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NBY38_RS22690 (NBY38_22690) | 215606..215932 | - | 327 | WP_015632512 | hypothetical protein | - |
| NBY38_RS22695 (NBY38_22695) | 215945..216193 | - | 249 | WP_004152675 | hypothetical protein | - |
| NBY38_RS22700 (NBY38_22700) | 216171..216425 | - | 255 | WP_032433943 | conjugal transfer protein TrbE | - |
| NBY38_RS22705 (NBY38_22705) | 216457..218412 | - | 1956 | WP_015065533 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NBY38_RS22710 (NBY38_22710) | 218471..219118 | - | 648 | WP_015632510 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NBY38_RS22715 (NBY38_22715) | 219394..220383 | - | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| NBY38_RS22720 (NBY38_22720) | 220380..220781 | - | 402 | WP_004194979 | hypothetical protein | - |
| NBY38_RS22725 (NBY38_22725) | 220816..221451 | - | 636 | WP_047670041 | type-F conjugative transfer system protein TraW | traW |
| NBY38_RS22730 (NBY38_22730) | 221451..221840 | - | 390 | WP_015632507 | type-F conjugative transfer system protein TrbI | - |
| NBY38_RS22735 (NBY38_22735) | 221840..224479 | - | 2640 | WP_015632506 | type IV secretion system protein TraC | virb4 |
| NBY38_RS22740 (NBY38_22740) | 224551..224949 | - | 399 | WP_015632505 | hypothetical protein | - |
| NBY38_RS22745 (NBY38_22745) | 224957..225346 | - | 390 | WP_015632504 | hypothetical protein | - |
| NBY38_RS22750 (NBY38_22750) | 225389..225793 | - | 405 | WP_032433941 | hypothetical protein | - |
| NBY38_RS22755 (NBY38_22755) | 225860..226171 | - | 312 | WP_015632502 | hypothetical protein | - |
| NBY38_RS22760 (NBY38_22760) | 226172..226390 | - | 219 | WP_004171484 | hypothetical protein | - |
| NBY38_RS22765 (NBY38_22765) | 226429..226698 | - | 270 | WP_032433956 | hypothetical protein | - |
| NBY38_RS22770 (NBY38_22770) | 226703..227113 | - | 411 | WP_015632501 | hypothetical protein | - |
| NBY38_RS22775 (NBY38_22775) | 227245..227829 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| NBY38_RS22780 (NBY38_22780) | 227852..228448 | - | 597 | WP_047670043 | conjugal transfer pilus-stabilizing protein TraP | - |
| NBY38_RS22785 (NBY38_22785) | 228441..229865 | - | 1425 | WP_015632498 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NBY38_RS22790 (NBY38_22790) | 229865..230605 | - | 741 | WP_047670045 | type-F conjugative transfer system secretin TraK | traK |
| NBY38_RS22795 (NBY38_22795) | 230592..231158 | - | 567 | WP_016831035 | type IV conjugative transfer system protein TraE | traE |
| NBY38_RS22800 (NBY38_22800) | 231178..231483 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| NBY38_RS22805 (NBY38_22805) | 231497..231865 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| NBY38_RS22810 (NBY38_22810) | 231927..232133 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| NBY38_RS22815 (NBY38_22815) | 232266..232985 | - | 720 | WP_016831034 | conjugal transfer protein TrbJ | - |
| NBY38_RS22820 (NBY38_22820) | 233185..233601 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NBY38_RS22825 (NBY38_22825) | 233992..234477 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| NBY38_RS22830 (NBY38_22830) | 234510..234839 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| NBY38_RS22835 (NBY38_22835) | 234872..235693 | - | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| NBY38_RS22840 (NBY38_22840) | 236521..237084 | - | 564 | WP_004182054 | methyltransferase | - |
| NBY38_RS22845 (NBY38_22845) | 237132..238487 | - | 1356 | WP_004182052 | DUF3560 domain-containing protein | - |
| NBY38_RS22850 (NBY38_22850) | 238539..238769 | - | 231 | WP_001568051 | hypothetical protein | - |
| NBY38_RS22855 (NBY38_22855) | 238861..239088 | - | 228 | WP_004182050 | hypothetical protein | - |