T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 660..19906
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JW299_RS00010 (JW299_00010) | 171..614 | - | 444 | WP_004152679 | F-type conjugal transfer protein TrbF | - |
| JW299_RS00015 (JW299_00015) | 660..1217 | - | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| JW299_RS00020 (JW299_00020) | 1189..1428 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JW299_RS00025 (JW299_00025) | 1439..2192 | - | 754 | Protein_4 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JW299_RS00030 (JW299_00030) | 2213..2543 | - | 331 | Protein_5 | hypothetical protein | - |
| JW299_RS00035 (JW299_00035) | 2556..2804 | - | 249 | WP_004152675 | hypothetical protein | - |
| JW299_RS00040 (JW299_00040) | 2782..3036 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| JW299_RS00045 (JW299_00045) | 3068..5027 | - | 1960 | Protein_8 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JW299_RS00050 (JW299_00050) | 5085..5723 | - | 639 | WP_004152672 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| JW299_RS00055 (JW299_00055) | 5736..6695 | - | 960 | WP_174806148 | conjugal transfer pilus assembly protein TraU | traU |
| JW299_RS00060 (JW299_00060) | 6804..7430 | - | 627 | WP_004152590 | type-F conjugative transfer system protein TraW | traW |
| JW299_RS00065 (JW299_00065) | 7430..7820 | - | 391 | Protein_12 | type-F conjugative transfer system protein TrbI | - |
| JW299_RS00070 (JW299_00070) | 7820..10459 | - | 2640 | WP_004152592 | type IV secretion system protein TraC | virb4 |
| JW299_RS00075 (JW299_00075) | 10531..10929 | - | 399 | WP_004153071 | hypothetical protein | - |
| JW299_RS00080 (JW299_00080) | 11232..11636 | - | 405 | WP_004152594 | hypothetical protein | - |
| JW299_RS00085 (JW299_00085) | 11703..12020 | - | 318 | WP_004152595 | hypothetical protein | - |
| JW299_RS00090 (JW299_00090) | 12021..12239 | - | 219 | WP_004171484 | hypothetical protein | - |
| JW299_RS00095 (JW299_00095) | 12263..12553 | - | 291 | WP_004152596 | hypothetical protein | - |
| JW299_RS00100 (JW299_00100) | 12558..12968 | - | 411 | WP_205459828 | hypothetical protein | - |
| JW299_RS00105 (JW299_00105) | 13100..13684 | - | 585 | WP_004161368 | type IV conjugative transfer system lipoprotein TraV | traV |
| JW299_RS00110 (JW299_00110) | 13798..15222 | - | 1425 | WP_004155033 | F-type conjugal transfer pilus assembly protein TraB | traB |
| JW299_RS00115 (JW299_00115) | 15222..15962 | - | 741 | WP_004152497 | type-F conjugative transfer system secretin TraK | traK |
| JW299_RS00120 (JW299_00120) | 15949..16515 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| JW299_RS00125 (JW299_00125) | 16535..16840 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| JW299_RS00130 (JW299_00130) | 16854..17222 | - | 369 | WP_004152496 | type IV conjugative transfer system pilin TraA | - |
| JW299_RS00135 (JW299_00135) | 17276..17662 | - | 387 | WP_004152495 | TraY domain-containing protein | - |
| JW299_RS00140 (JW299_00140) | 17741..18427 | - | 687 | WP_004152494 | transcriptional regulator TraJ family protein | - |
| JW299_RS00145 (JW299_00145) | 18601..18999 | - | 399 | WP_004152493 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JW299_RS00150 (JW299_00150) | 19421..19906 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| JW299_RS00155 (JW299_00155) | 19939..20268 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| JW299_RS00160 (JW299_00160) | 20301..21122 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| JW299_RS00165 (JW299_00165) | 21942..22775 | - | 834 | WP_004152751 | N-6 DNA methylase | - |
| JW299_RS00170 (JW299_00170) | 22826..22972 | - | 147 | WP_004152750 | hypothetical protein | - |
| JW299_RS00175 (JW299_00175) | 23067..23414 | - | 348 | WP_004152749 | hypothetical protein | - |
| JW299_RS00180 (JW299_00180) | 23471..23824 | - | 354 | WP_004152748 | hypothetical protein | - |
| JW299_RS00185 (JW299_00185) | 24454..24804 | - | 351 | WP_004153414 | hypothetical protein | - |