T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 25045..34468
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PYH38_RS29250 (PYH38_005849) | 21121..22830 | + | 1710 | WP_280736383 | type IV secretion system ATPase VirD4 | - |
| PYH38_RS29255 (PYH38_005850) | 22967..23161 | + | 195 | WP_280736384 | hypothetical protein | - |
| PYH38_RS29260 (PYH38_005851) | 23270..23974 | - | 705 | WP_280736604 | response regulator | - |
| PYH38_RS29265 (PYH38_005852) | 25045..26085 | - | 1041 | WP_280736385 | P-type DNA transfer ATPase VirB11 | virB11 |
| PYH38_RS29270 (PYH38_005853) | 26124..27248 | - | 1125 | WP_280736386 | type IV secretion system protein VirB10 | virB10 |
| PYH38_RS29275 (PYH38_005854) | 27245..28126 | - | 882 | WP_280736387 | P-type conjugative transfer protein VirB9 | virB9 |
| PYH38_RS29280 (PYH38_005855) | 28123..28836 | - | 714 | WP_280663469 | type IV secretion system protein VirB8 | virB8 |
| PYH38_RS29285 (PYH38_005856) | 28823..28990 | - | 168 | WP_194732549 | type IV secretion system lipoprotein VirB7 | - |
| PYH38_RS29290 (PYH38_005857) | 29024..29911 | - | 888 | WP_280736388 | type IV secretion system protein | virB6 |
| PYH38_RS29295 (PYH38_005858) | 29990..30670 | - | 681 | WP_280736389 | pilin minor subunit VirB5 | - |
| PYH38_RS29300 (PYH38_005859) | 30684..33053 | - | 2370 | WP_280736390 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| PYH38_RS29305 (PYH38_005860) | 33053..33379 | - | 327 | WP_280663465 | type IV secretion system protein VirB3 | virB3 |
| PYH38_RS29310 (PYH38_005861) | 33379..33741 | - | 363 | WP_280663464 | pilin major subunit VirB2 | virB2 |
| PYH38_RS29315 (PYH38_005862) | 33761..34468 | - | 708 | WP_280736391 | type IV secretion system lytic transglycosylase VirB1 | virB1 |
| PYH38_RS29320 (PYH38_005863) | 35538..35777 | + | 240 | WP_280736392 | helix-turn-helix transcriptional regulator | - |
| PYH38_RS29325 (PYH38_005864) | 35919..36521 | - | 603 | WP_280736393 | hypothetical protein | - |
| PYH38_RS29330 (PYH38_005865) | 36778..37041 | - | 264 | Protein_34 | transposase | - |
| PYH38_RS29335 (PYH38_005866) | 37314..37661 | - | 348 | WP_280736394 | hypothetical protein | - |