T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43388..59158
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM12761_RS28050 (ECRM12761_27710) | 43388..45541 | - | 2154 | WP_001369365 | type IV conjugative transfer system coupling protein TraD | virb4 |
| ECRM12761_RS28055 (ECRM12761_27715) | 45793..46524 | - | 732 | WP_000782454 | conjugal transfer complement resistance protein TraT | - |
| ECRM12761_RS28060 | 46573..47058 | - | 486 | WP_000605868 | hypothetical protein | - |
| ECRM12761_RS28065 (ECRM12761_27725) | 47074..49635 | - | 2562 | Protein_50 | conjugal transfer mating-pair stabilization protein TraG | - |
| ECRM12761_RS28075 | 49685..50898 | + | 1214 | WP_136952279 | IS3 family transposase | - |
| ECRM12761_RS33055 | 50945..51214 | - | 270 | Protein_52 | hypothetical protein | - |
| ECRM12761_RS30970 (ECRM12761_27735) | 51207..51428 | - | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| ECRM12761_RS28085 (ECRM12761_27740) | 51563..52078 | - | 516 | WP_021532964 | type IV conjugative transfer system lipoprotein TraV | traV |
| ECRM12761_RS28090 (ECRM12761_27745) | 52075..52326 | - | 252 | WP_001038348 | conjugal transfer protein TrbG | - |
| ECRM12761_RS28095 (ECRM12761_27750) | 52319..52639 | - | 321 | WP_025380715 | conjugal transfer protein TrbD | virb4 |
| ECRM12761_RS28100 (ECRM12761_27755) | 52626..53213 | - | 588 | WP_025380716 | conjugal transfer pilus-stabilizing protein TraP | - |
| ECRM12761_RS28105 (ECRM12761_27760) | 53203..54630 | - | 1428 | WP_025380717 | F-type conjugal transfer pilus assembly protein TraB | traB |
| ECRM12761_RS28110 (ECRM12761_27765) | 54630..55358 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| ECRM12761_RS28115 (ECRM12761_27770) | 55345..55911 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| ECRM12761_RS28120 (ECRM12761_27775) | 55933..56244 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| ECRM12761_RS28125 (ECRM12761_27780) | 56259..56618 | - | 360 | WP_000340272 | type IV conjugative transfer system pilin TraA | - |
| ECRM12761_RS28130 (ECRM12761_27785) | 56652..56879 | - | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| ECRM12761_RS28135 (ECRM12761_27790) | 56974..57660 | - | 687 | WP_025380718 | PAS domain-containing protein | - |
| ECRM12761_RS28140 (ECRM12761_27795) | 57851..58234 | - | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| ECRM12761_RS28145 (ECRM12761_27800) | 58511..59158 | + | 648 | WP_122994606 | transglycosylase SLT domain-containing protein | virB1 |
| ECRM12761_RS28150 (ECRM12761_27810) | 59455..60276 | - | 822 | WP_001234426 | DUF932 domain-containing protein | - |
| ECRM12761_RS28155 (ECRM12761_27815) | 60394..60681 | - | 288 | WP_000107535 | hypothetical protein | - |
| ECRM12761_RS33570 | 60706..60912 | - | 207 | WP_000547968 | hypothetical protein | - |
| ECRM12761_RS33575 | 60982..61155 | + | 174 | Protein_70 | hypothetical protein | - |
| ECRM12761_RS33580 (ECRM12761_27820) | 61153..61383 | - | 231 | WP_001426396 | hypothetical protein | - |
| ECRM12761_RS28170 | 61603..61728 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| ECRM12761_RS33585 | 61670..61819 | - | 150 | Protein_73 | plasmid maintenance protein Mok | - |
| ECRM12761_RS32820 (ECRM12761_27825) | 61841..62029 | + | 189 | WP_001299721 | hypothetical protein | - |
| ECRM12761_RS28180 (ECRM12761_27830) | 61998..62760 | - | 763 | Protein_75 | plasmid SOS inhibition protein A | - |
| ECRM12761_RS28185 (ECRM12761_27835) | 62757..63191 | - | 435 | WP_025380720 | conjugation system SOS inhibitor PsiB | - |
| ECRM12761_RS30980 (ECRM12761_27840) | 63246..63443 | - | 198 | Protein_77 | hypothetical protein | - |
| ECRM12761_RS28190 (ECRM12761_27845) | 63471..63704 | - | 234 | WP_025380721 | DUF905 family protein | - |