T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 136263..149153
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFD27_RS20395 (RFYW14_04125) | 134565..135095 | + | 531 | WP_077548312 | conjugative transfer signal peptidase TraF | - |
| GFD27_RS20400 (RFYW14_04126) | 135085..136248 | + | 1164 | WP_077548311 | conjugal transfer protein TraB | - |
| GFD27_RS20405 (RFYW14_04127) | 136263..136871 | + | 609 | WP_077548310 | TraH family protein | virB1 |
| GFD27_RS20410 (RFYW14_04128) | 136920..137297 | - | 378 | WP_077548309 | DUF5615 family PIN-like protein | - |
| GFD27_RS20415 (RFYW14_04129) | 137302..137925 | - | 624 | WP_077548308 | DUF433 domain-containing protein | - |
| GFD27_RS20420 (RFYW14_04130) | 138047..138265 | - | 219 | WP_077548307 | helix-turn-helix transcriptional regulator | - |
| GFD27_RS20425 (RFYW14_04131) | 138405..138725 | + | 321 | WP_172977928 | transcriptional repressor TraM | - |
| GFD27_RS20430 (RFYW14_04132) | 138727..139428 | - | 702 | WP_235864267 | autoinducer binding domain-containing protein | - |
| GFD27_RS20435 (RFYW14_04133) | 139649..140947 | - | 1299 | WP_077548305 | IncP-type conjugal transfer protein TrbI | virB10 |
| GFD27_RS20440 (RFYW14_04134) | 140963..141400 | - | 438 | WP_077548304 | conjugal transfer protein TrbH | - |
| GFD27_RS20445 (RFYW14_04135) | 141404..142216 | - | 813 | WP_077548303 | P-type conjugative transfer protein TrbG | virB9 |
| GFD27_RS20450 (RFYW14_04136) | 142233..142895 | - | 663 | WP_077548302 | conjugal transfer protein TrbF | virB8 |
| GFD27_RS20455 (RFYW14_04137) | 142917..144095 | - | 1179 | WP_077548301 | P-type conjugative transfer protein TrbL | virB6 |
| GFD27_RS20460 (RFYW14_04138) | 144089..144292 | - | 204 | WP_077548300 | entry exclusion protein TrbK | - |
| GFD27_RS20465 (RFYW14_04139) | 144289..145092 | - | 804 | WP_077548299 | P-type conjugative transfer protein TrbJ | virB5 |
| GFD27_RS20470 (RFYW14_04140) | 145064..147520 | - | 2457 | WP_077548298 | conjugal transfer protein TrbE | virb4 |
| GFD27_RS20475 (RFYW14_04141) | 147531..147815 | - | 285 | WP_235864266 | conjugal transfer protein TrbD | virB3 |
| GFD27_RS20480 (RFYW14_04142) | 147812..148192 | - | 381 | WP_077548296 | TrbC/VirB2 family protein | virB2 |
| GFD27_RS20485 (RFYW14_04143) | 148182..149153 | - | 972 | WP_077548295 | P-type conjugative transfer ATPase TrbB | virB11 |
| GFD27_RS20490 (RFYW14_04144) | 149156..149782 | - | 627 | WP_077548294 | acyl-homoserine-lactone synthase TraI | - |
| GFD27_RS20495 (RFYW14_04145) | 150151..151338 | + | 1188 | WP_077548293 | plasmid partitioning protein RepA | - |
| GFD27_RS20500 (RFYW14_04146) | 151413..152399 | + | 987 | WP_077548292 | plasmid partitioning protein RepB | - |
| GFD27_RS20505 (RFYW14_04147) | 152554..153777 | + | 1224 | WP_077548291 | plasmid replication protein RepC | - |