T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 531585..544823
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RTCIAT899_RS22120 (RTCIAT899_PB02875) | 529850..530416 | + | 567 | WP_004119831 | conjugative transfer signal peptidase TraF | - |
| RTCIAT899_RS22125 (RTCIAT899_PB02880) | 530406..531569 | + | 1164 | WP_004119833 | conjugal transfer protein TraB | - |
| RTCIAT899_RS22130 (RTCIAT899_PB02885) | 531585..532193 | + | 609 | WP_004119835 | TraH family protein | virB1 |
| RTCIAT899_RS22135 (RTCIAT899_PB02890) | 532457..532693 | - | 237 | WP_004119837 | helix-turn-helix transcriptional regulator | - |
| RTCIAT899_RS22140 (RTCIAT899_PB02895) | 532943..533257 | + | 315 | WP_004119838 | transcriptional repressor TraM | - |
| RTCIAT899_RS22145 (RTCIAT899_PB02900) | 533261..533929 | - | 669 | WP_051043311 | autoinducer binding domain-containing protein | - |
| RTCIAT899_RS22150 (RTCIAT899_PB02905) | 534013..535209 | + | 1197 | WP_004110519 | IS256 family transposase | - |
| RTCIAT899_RS22155 (RTCIAT899_PB02910) | 535491..536792 | - | 1302 | WP_004119844 | IncP-type conjugal transfer protein TrbI | virB10 |
| RTCIAT899_RS22160 (RTCIAT899_PB02915) | 536803..537237 | - | 435 | WP_004119847 | conjugal transfer protein TrbH | - |
| RTCIAT899_RS22165 (RTCIAT899_PB02920) | 537241..538053 | - | 813 | WP_004119849 | P-type conjugative transfer protein TrbG | virB9 |
| RTCIAT899_RS22170 (RTCIAT899_PB02925) | 538070..538732 | - | 663 | WP_004119850 | conjugal transfer protein TrbF | virB8 |
| RTCIAT899_RS22175 (RTCIAT899_PB02930) | 538757..539935 | - | 1179 | WP_004119851 | P-type conjugative transfer protein TrbL | virB6 |
| RTCIAT899_RS22180 (RTCIAT899_PB02935) | 539940..540743 | - | 804 | WP_004119852 | P-type conjugative transfer protein TrbJ | virB5 |
| RTCIAT899_RS22185 (RTCIAT899_PB02940) | 540715..543171 | - | 2457 | WP_004119853 | conjugal transfer protein TrbE | virb4 |
| RTCIAT899_RS22190 (RTCIAT899_PB02945) | 543181..543480 | - | 300 | WP_004119854 | conjugal transfer protein TrbD | virB3 |
| RTCIAT899_RS22195 (RTCIAT899_PB02950) | 543473..543856 | - | 384 | WP_004119857 | TrbC/VirB2 family protein | virB2 |
| RTCIAT899_RS22200 (RTCIAT899_PB02955) | 543846..544823 | - | 978 | WP_004119858 | P-type conjugative transfer ATPase TrbB | virB11 |
| RTCIAT899_RS22205 (RTCIAT899_PB02960) | 544820..545458 | - | 639 | WP_004119859 | acyl-homoserine-lactone synthase TraI | - |
| RTCIAT899_RS22210 (RTCIAT899_PB02965) | 545837..547057 | + | 1221 | WP_028755142 | plasmid partitioning protein RepA | - |
| RTCIAT899_RS22215 (RTCIAT899_PB02970) | 547117..548091 | + | 975 | WP_004119861 | plasmid partitioning protein RepB | - |
| RTCIAT899_RS22220 (RTCIAT899_PB02975) | 548253..549467 | + | 1215 | WP_004119862 | plasmid replication protein RepC | - |