T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 198588..211981
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RTCIAT899_RS19535 (RTCIAT899_PA01015) | 196851..197417 | + | 567 | WP_081598417 | conjugative transfer signal peptidase TraF | - |
| RTCIAT899_RS19540 (RTCIAT899_PA01020) | 197407..198570 | + | 1164 | WP_015341949 | conjugal transfer protein TraB | - |
| RTCIAT899_RS19545 (RTCIAT899_PA01025) | 198588..199199 | + | 612 | WP_015341950 | TraH family protein | virB1 |
| RTCIAT899_RS19550 (RTCIAT899_PA01030) | 199330..199746 | + | 417 | WP_013984772 | DUF6088 family protein | - |
| RTCIAT899_RS19555 (RTCIAT899_PA01035) | 199736..200647 | + | 912 | WP_244441486 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| RTCIAT899_RS19560 (RTCIAT899_PA01040) | 200713..200931 | - | 219 | WP_015341952 | helix-turn-helix transcriptional regulator | - |
| RTCIAT899_RS19565 (RTCIAT899_PA01045) | 201117..201437 | + | 321 | WP_013984775 | transcriptional repressor TraM | - |
| RTCIAT899_RS19570 (RTCIAT899_PA01050) | 201434..202147 | - | 714 | WP_041678075 | autoinducer binding domain-containing protein | - |
| RTCIAT899_RS19575 (RTCIAT899_PA01055) | 202471..203766 | - | 1296 | WP_013984777 | IncP-type conjugal transfer protein TrbI | virB10 |
| RTCIAT899_RS19580 (RTCIAT899_PA01060) | 203784..204224 | - | 441 | WP_013984778 | conjugal transfer protein TrbH | - |
| RTCIAT899_RS19585 (RTCIAT899_PA01065) | 204228..205040 | - | 813 | WP_015341954 | P-type conjugative transfer protein TrbG | virB9 |
| RTCIAT899_RS19590 (RTCIAT899_PA01070) | 205058..205720 | - | 663 | WP_013984780 | conjugal transfer protein TrbF | virB8 |
| RTCIAT899_RS19595 (RTCIAT899_PA01075) | 205745..206923 | - | 1179 | WP_013984781 | P-type conjugative transfer protein TrbL | virB6 |
| RTCIAT899_RS19600 (RTCIAT899_PA01080) | 206928..207104 | - | 177 | WP_013984782 | entry exclusion protein TrbK | - |
| RTCIAT899_RS19605 (RTCIAT899_PA01085) | 207098..207901 | - | 804 | WP_015341955 | P-type conjugative transfer protein TrbJ | virB5 |
| RTCIAT899_RS19610 (RTCIAT899_PA01090) | 207873..210329 | - | 2457 | WP_015341956 | conjugal transfer protein TrbE | virb4 |
| RTCIAT899_RS19615 (RTCIAT899_PA01095) | 210339..210638 | - | 300 | WP_013984785 | conjugal transfer protein TrbD | virB3 |
| RTCIAT899_RS19620 (RTCIAT899_PA01100) | 210631..211014 | - | 384 | WP_013984786 | TrbC/VirB2 family protein | virB2 |
| RTCIAT899_RS19625 (RTCIAT899_PA01105) | 211004..211981 | - | 978 | WP_015341957 | P-type conjugative transfer ATPase TrbB | virB11 |
| RTCIAT899_RS19630 (RTCIAT899_PA01110) | 211992..212618 | - | 627 | WP_015341958 | acyl-homoserine-lactone synthase TraI | - |
| RTCIAT899_RS19635 (RTCIAT899_PA01115) | 213007..214221 | + | 1215 | WP_013984789 | plasmid partitioning protein RepA | - |
| RTCIAT899_RS19640 (RTCIAT899_PA01120) | 214218..215243 | + | 1026 | WP_013984790 | plasmid partitioning protein RepB | - |
| RTCIAT899_RS19645 (RTCIAT899_PA01125) | 215399..216610 | + | 1212 | WP_013984791 | plasmid replication protein RepC | - |