T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1666..38177
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F60_RS25610 (L0F60_25610) | 1042..1656 | + | 615 | WP_000959786 | type 4 pilus major pilin | - |
| L0F60_RS25615 (L0F60_25615) | 1666..2226 | + | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| L0F60_RS25620 (L0F60_25620) | 2211..2867 | + | 657 | WP_001193553 | prepilin peptidase | - |
| L0F60_RS25625 (L0F60_25625) | 2867..4201 | + | 1335 | WP_001496527 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| L0F60_RS26255 | 4969..5193 | + | 225 | Protein_5 | hypothetical protein | - |
| L0F60_RS25630 (L0F60_25635) | 5945..7099 | + | 1155 | WP_001139958 | site-specific integrase | - |
| L0F60_RS25635 (L0F60_25640) | 7250..8074 | + | 825 | WP_001238929 | conjugal transfer protein TraE | traE |
| L0F60_RS25640 (L0F60_25645) | 8160..9362 | + | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| L0F60_RS25645 (L0F60_25650) | 9422..10006 | + | 585 | WP_001579766 | histidine phosphatase family protein | - |
| L0F60_RS25650 (L0F60_25655) | 10401..10859 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| L0F60_RS25655 (L0F60_25660) | 10856..11674 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| L0F60_RS25660 (L0F60_25665) | 11671..12819 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| L0F60_RS25665 (L0F60_25670) | 12816..13106 | + | 291 | WP_001372180 | hypothetical protein | traK |
| L0F60_RS25670 (L0F60_25675) | 13121..13672 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| L0F60_RS25675 (L0F60_25680) | 13762..17529 | + | 3768 | WP_001579768 | LPD7 domain-containing protein | - |
| L0F60_RS25680 (L0F60_25685) | 17547..17894 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| L0F60_RS25685 (L0F60_25690) | 17891..18583 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| L0F60_RS25690 (L0F60_25695) | 18594..19577 | + | 984 | WP_001579769 | IncI1-type conjugal transfer protein TraN | traN |
| L0F60_RS25695 (L0F60_25700) | 19580..20869 | + | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| L0F60_RS25700 (L0F60_25705) | 20869..21573 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| L0F60_RS25705 (L0F60_25710) | 21573..22100 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| L0F60_RS25710 (L0F60_25715) | 22151..22555 | + | 405 | WP_001579770 | DUF6750 family protein | traR |
| L0F60_RS25715 (L0F60_25720) | 22619..22807 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| L0F60_RS25720 (L0F60_25725) | 22791..23591 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| L0F60_RS25725 (L0F60_25730) | 23681..26725 | + | 3045 | WP_001024752 | IncI1-type conjugal transfer protein TraU | traU |
| L0F60_RS25730 (L0F60_25735) | 26725..27339 | + | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| L0F60_RS25735 (L0F60_25740) | 27306..28508 | + | 1203 | WP_001579773 | IncI1-type conjugal transfer protein TraW | traW |
| L0F60_RS25740 (L0F60_25745) | 28537..29121 | + | 585 | WP_001579774 | IncI1-type conjugal transfer protein TraX | - |
| L0F60_RS25745 (L0F60_25750) | 29218..31386 | + | 2169 | WP_000698360 | IncI1-type conjugal transfer membrane protein TraY | traY |
| L0F60_RS25750 (L0F60_25755) | 31462..32076 | + | 615 | WP_000578649 | plasmid IncI1-type surface exclusion protein ExcA | - |
| L0F60_RS25755 (L0F60_25760) | 32174..32383 | + | 210 | WP_001140545 | hemolysin expression modulator Hha | - |
| L0F60_RS25760 (L0F60_25765) | 32592..32768 | + | 177 | WP_001054900 | hypothetical protein | - |
| L0F60_RS25765 (L0F60_25770) | 33692..33943 | + | 252 | WP_001291968 | hypothetical protein | - |
| L0F60_RS25770 (L0F60_25775) | 34015..34167 | - | 153 | WP_001303307 | Hok/Gef family protein | - |
| L0F60_RS25775 (L0F60_25780) | 34794..35573 | + | 780 | WP_275450201 | protein FinQ | - |
| L0F60_RS25780 (L0F60_25785) | 35880..37088 | + | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| L0F60_RS25785 (L0F60_25790) | 37107..38177 | + | 1071 | WP_000151582 | IncI1-type conjugal transfer protein TrbB | trbB |
| L0F60_RS25790 (L0F60_25795) | 38170..40461 | + | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |