T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43387..59157
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM13516_RS27690 (ECRM13516_5486) | 43387..45540 | - | 2154 | WP_001369365 | type IV conjugative transfer system coupling protein TraD | virb4 |
| ECRM13516_RS27695 (ECRM13516_5487) | 45792..46523 | - | 732 | WP_000782454 | conjugal transfer complement resistance protein TraT | - |
| ECRM13516_RS27700 | 46572..47057 | - | 486 | WP_000605868 | hypothetical protein | - |
| ECRM13516_RS27705 (ECRM13516_5489) | 47073..49634 | - | 2562 | Protein_50 | conjugal transfer mating-pair stabilization protein TraG | - |
| ECRM13516_RS27715 (ECRM13516_5491) | 49684..50897 | + | 1214 | WP_136952279 | IS3 family transposase | - |
| ECRM13516_RS33040 | 50944..51213 | - | 270 | Protein_52 | hypothetical protein | - |
| ECRM13516_RS30905 (ECRM13516_5492) | 51206..51427 | - | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| ECRM13516_RS27725 (ECRM13516_5493) | 51562..52077 | - | 516 | WP_021532964 | type IV conjugative transfer system lipoprotein TraV | traV |
| ECRM13516_RS27730 (ECRM13516_5494) | 52074..52325 | - | 252 | WP_001038348 | conjugal transfer protein TrbG | - |
| ECRM13516_RS27735 (ECRM13516_5495) | 52318..52638 | - | 321 | WP_025380715 | conjugal transfer protein TrbD | virb4 |
| ECRM13516_RS27740 (ECRM13516_5496) | 52625..53212 | - | 588 | WP_025380716 | conjugal transfer pilus-stabilizing protein TraP | - |
| ECRM13516_RS27745 (ECRM13516_5497) | 53202..54629 | - | 1428 | WP_025380717 | F-type conjugal transfer pilus assembly protein TraB | traB |
| ECRM13516_RS27750 (ECRM13516_5498) | 54629..55357 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| ECRM13516_RS27755 (ECRM13516_5499) | 55344..55910 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| ECRM13516_RS27760 (ECRM13516_5500) | 55932..56243 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| ECRM13516_RS27765 (ECRM13516_5501) | 56258..56617 | - | 360 | WP_000340272 | type IV conjugative transfer system pilin TraA | - |
| ECRM13516_RS27770 (ECRM13516_5502) | 56651..56878 | - | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| ECRM13516_RS27775 (ECRM13516_5503) | 56973..57659 | - | 687 | WP_025380718 | PAS domain-containing protein | - |
| ECRM13516_RS27780 (ECRM13516_5504) | 57850..58233 | - | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| ECRM13516_RS27785 (ECRM13516_5505) | 58510..59157 | + | 648 | WP_122994606 | transglycosylase SLT domain-containing protein | virB1 |
| ECRM13516_RS27790 (ECRM13516_5507) | 59454..60275 | - | 822 | WP_001234426 | DUF932 domain-containing protein | - |
| ECRM13516_RS27795 (ECRM13516_5508) | 60393..60680 | - | 288 | WP_000107535 | hypothetical protein | - |
| ECRM13516_RS33550 | 60705..60911 | - | 207 | WP_000547968 | hypothetical protein | - |
| ECRM13516_RS33555 | 60981..61154 | + | 174 | Protein_70 | hypothetical protein | - |
| ECRM13516_RS33560 (ECRM13516_5509) | 61152..61382 | - | 231 | WP_001426396 | hypothetical protein | - |
| ECRM13516_RS27810 | 61602..61727 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| ECRM13516_RS33565 | 61669..61818 | - | 150 | Protein_73 | plasmid maintenance protein Mok | - |
| ECRM13516_RS32825 (ECRM13516_5510) | 61840..62028 | + | 189 | WP_001299721 | hypothetical protein | - |
| ECRM13516_RS27820 (ECRM13516_5511) | 61997..62759 | - | 763 | Protein_75 | plasmid SOS inhibition protein A | - |
| ECRM13516_RS27825 (ECRM13516_5512) | 62756..63190 | - | 435 | WP_025380720 | conjugation system SOS inhibitor PsiB | - |
| ECRM13516_RS30915 (ECRM13516_5513) | 63245..63442 | - | 198 | Protein_77 | hypothetical protein | - |
| ECRM13516_RS27830 (ECRM13516_5514) | 63470..63703 | - | 234 | WP_025380721 | DUF905 family protein | - |