T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 47013..75485
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDV36_RS03440 (QDV36_03435) | 47013..49325 | - | 2313 | WP_069985711 | type IV conjugative transfer system coupling protein TraD | virb4 |
| QDV36_RS03445 (QDV36_03440) | 49454..50143 | - | 690 | WP_072101983 | hypothetical protein | - |
| QDV36_RS03450 (QDV36_03445) | 50336..51067 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| QDV36_RS03455 (QDV36_03450) | 51253..51786 | - | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| QDV36_RS03460 (QDV36_03455) | 51789..54638 | - | 2850 | WP_013609534 | conjugal transfer mating-pair stabilization protein TraG | traG |
| QDV36_RS03465 (QDV36_03460) | 54638..56017 | - | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| QDV36_RS03470 (QDV36_03465) | 55995..56438 | - | 444 | WP_004194305 | F-type conjugal transfer protein TrbF | - |
| QDV36_RS03475 (QDV36_03470) | 56484..57041 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| QDV36_RS03480 (QDV36_03475) | 57013..57252 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QDV36_RS03485 (QDV36_03480) | 57263..58015 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| QDV36_RS03490 (QDV36_03485) | 58036..58362 | - | 327 | WP_004152676 | hypothetical protein | - |
| QDV36_RS03495 (QDV36_03490) | 58375..58623 | - | 249 | WP_004152675 | hypothetical protein | - |
| QDV36_RS03500 (QDV36_03495) | 58601..58855 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| QDV36_RS03505 (QDV36_03500) | 58887..60842 | - | 1956 | WP_030003482 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| QDV36_RS03510 (QDV36_03505) | 60901..61539 | - | 639 | WP_069985712 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| QDV36_RS03515 (QDV36_03510) | 61552..62541 | - | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| QDV36_RS03520 (QDV36_03515) | 62538..62939 | - | 402 | WP_004194979 | hypothetical protein | - |
| QDV36_RS03525 (QDV36_03520) | 62974..63609 | - | 636 | WP_029497419 | type-F conjugative transfer system protein TraW | traW |
| QDV36_RS03530 (QDV36_03525) | 63609..63998 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| QDV36_RS03535 (QDV36_03530) | 63998..66637 | - | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| QDV36_RS03540 (QDV36_03535) | 66709..67107 | - | 399 | WP_023179972 | hypothetical protein | - |
| QDV36_RS03545 (QDV36_03540) | 67485..67889 | - | 405 | WP_004197817 | hypothetical protein | - |
| QDV36_RS03550 (QDV36_03545) | 67956..68267 | - | 312 | WP_029497417 | hypothetical protein | - |
| QDV36_RS03555 (QDV36_03550) | 68268..68486 | - | 219 | WP_004195468 | hypothetical protein | - |
| QDV36_RS03560 (QDV36_03555) | 68809..69393 | - | 585 | WP_032440547 | type IV conjugative transfer system lipoprotein TraV | traV |
| QDV36_RS03565 (QDV36_03560) | 69466..70890 | - | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| QDV36_RS03570 (QDV36_03565) | 70890..71630 | - | 741 | WP_013023821 | type-F conjugative transfer system secretin TraK | traK |
| QDV36_RS03575 (QDV36_03570) | 71617..72183 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| QDV36_RS03580 (QDV36_03575) | 72203..72508 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| QDV36_RS03585 (QDV36_03580) | 72522..72890 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| QDV36_RS03590 (QDV36_03585) | 72959..73159 | - | 201 | WP_004194116 | TraY domain-containing protein | - |
| QDV36_RS03595 (QDV36_03590) | 73245..73946 | - | 702 | WP_004194113 | hypothetical protein | - |
| QDV36_RS03600 (QDV36_03595) | 74176..74568 | - | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDV36_RS03605 (QDV36_03600) | 75000..75485 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| QDV36_RS03610 (QDV36_03605) | 75518..75847 | - | 330 | WP_047066474 | DUF5983 family protein | - |
| QDV36_RS03615 (QDV36_03610) | 75880..76701 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| QDV36_RS03620 (QDV36_03615) | 77531..77944 | - | 414 | WP_023287139 | helix-turn-helix domain-containing protein | - |
| QDV36_RS03625 (QDV36_03620) | 77945..78223 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| QDV36_RS03630 (QDV36_03625) | 78213..78533 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDV36_RS03635 (QDV36_03630) | 78614..78838 | - | 225 | WP_014343499 | hypothetical protein | - |
| QDV36_RS03640 (QDV36_03635) | 78849..79061 | - | 213 | WP_019706020 | hypothetical protein | - |
| QDV36_RS03645 (QDV36_03640) | 79154..80134 | + | 981 | WP_000019445 | IS5-like element ISKpn26 family transposase | - |