T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43816..63015
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDV38_RS01550 (QDV38_01555) | 38900..39211 | + | 312 | WP_004187333 | hypothetical protein | - |
| QDV38_RS01555 (QDV38_01560) | 39344..39880 | + | 537 | WP_004187332 | hypothetical protein | - |
| QDV38_RS01560 (QDV38_01565) | 40382..40777 | - | 396 | WP_019725163 | hypothetical protein | - |
| QDV38_RS01565 (QDV38_01570) | 40812..41339 | + | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| QDV38_RS01570 (QDV38_01575) | 41326..43305 | + | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| QDV38_RS01575 (QDV38_01580) | 43319..43819 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| QDV38_RS01580 (QDV38_01585) | 43816..44595 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| QDV38_RS01585 (QDV38_01590) | 44606..45769 | + | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| QDV38_RS01590 (QDV38_01595) | 45759..46019 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| QDV38_RS01595 (QDV38_01600) | 46044..49391 | + | 3348 | WP_223807062 | LPD7 domain-containing protein | - |
| QDV38_RS01600 (QDV38_01605) | 49357..49869 | + | 513 | WP_011091071 | hypothetical protein | traL |
| QDV38_RS01605 (QDV38_01610) | 49870..50082 | - | 213 | WP_305953721 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| QDV38_RS01610 (QDV38_01615) | 50054..50464 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| QDV38_RS01615 (QDV38_01620) | 50532..51245 | + | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| QDV38_RS01620 (QDV38_01625) | 51254..52405 | + | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| QDV38_RS01625 (QDV38_01630) | 52417..53766 | + | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| QDV38_RS01630 (QDV38_01635) | 53778..54482 | + | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| QDV38_RS01635 (QDV38_01640) | 54506..55036 | + | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| QDV38_RS01640 (QDV38_01645) | 55053..55442 | + | 390 | WP_004187479 | DUF6750 family protein | traR |
| QDV38_RS01645 (QDV38_01650) | 55488..55982 | + | 495 | WP_004187480 | hypothetical protein | - |
| QDV38_RS01650 (QDV38_01655) | 55979..59029 | + | 3051 | WP_004187482 | hypothetical protein | traU |
| QDV38_RS01655 (QDV38_01660) | 59026..60234 | + | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| QDV38_RS01660 (QDV38_01665) | 60231..60827 | + | 597 | WP_015060003 | hypothetical protein | - |
| QDV38_RS01665 (QDV38_01670) | 60820..63015 | + | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| QDV38_RS01670 (QDV38_01675) | 63017..63670 | + | 654 | WP_015060005 | hypothetical protein | - |
| QDV38_RS01675 (QDV38_01680) | 63751..63981 | + | 231 | WP_011091085 | IncL/M type plasmid replication protein RepC | - |