T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 47005..75477
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDV37_RS03390 (QDV37_03390) | 47005..49317 | - | 2313 | WP_069985711 | type IV conjugative transfer system coupling protein TraD | virb4 |
| QDV37_RS03395 (QDV37_03395) | 49446..50135 | - | 690 | WP_072101983 | hypothetical protein | - |
| QDV37_RS03400 (QDV37_03400) | 50328..51059 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| QDV37_RS03405 (QDV37_03405) | 51245..51778 | - | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| QDV37_RS03410 (QDV37_03410) | 51781..54630 | - | 2850 | WP_013609534 | conjugal transfer mating-pair stabilization protein TraG | traG |
| QDV37_RS03415 (QDV37_03415) | 54630..56009 | - | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| QDV37_RS03420 (QDV37_03420) | 55987..56430 | - | 444 | WP_004194305 | F-type conjugal transfer protein TrbF | - |
| QDV37_RS03425 (QDV37_03425) | 56476..57033 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| QDV37_RS03430 (QDV37_03430) | 57005..57244 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QDV37_RS03435 (QDV37_03435) | 57255..58007 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| QDV37_RS03440 (QDV37_03440) | 58028..58354 | - | 327 | WP_004152676 | hypothetical protein | - |
| QDV37_RS03445 (QDV37_03445) | 58367..58615 | - | 249 | WP_004152675 | hypothetical protein | - |
| QDV37_RS03450 (QDV37_03450) | 58593..58847 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| QDV37_RS03455 (QDV37_03455) | 58879..60834 | - | 1956 | WP_030003482 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| QDV37_RS03460 (QDV37_03460) | 60893..61531 | - | 639 | WP_069985712 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| QDV37_RS03465 (QDV37_03465) | 61544..62533 | - | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| QDV37_RS03470 (QDV37_03470) | 62530..62931 | - | 402 | WP_004194979 | hypothetical protein | - |
| QDV37_RS03475 (QDV37_03475) | 62966..63601 | - | 636 | WP_029497419 | type-F conjugative transfer system protein TraW | traW |
| QDV37_RS03480 (QDV37_03480) | 63601..63990 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| QDV37_RS03485 (QDV37_03485) | 63990..66629 | - | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| QDV37_RS03490 (QDV37_03490) | 66701..67099 | - | 399 | WP_023179972 | hypothetical protein | - |
| QDV37_RS03495 (QDV37_03495) | 67477..67881 | - | 405 | WP_004197817 | hypothetical protein | - |
| QDV37_RS03500 (QDV37_03500) | 67948..68259 | - | 312 | WP_029497417 | hypothetical protein | - |
| QDV37_RS03505 (QDV37_03505) | 68260..68478 | - | 219 | WP_004195468 | hypothetical protein | - |
| QDV37_RS03510 (QDV37_03510) | 68801..69385 | - | 585 | WP_032440547 | type IV conjugative transfer system lipoprotein TraV | traV |
| QDV37_RS03515 (QDV37_03515) | 69458..70882 | - | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| QDV37_RS03520 (QDV37_03520) | 70882..71622 | - | 741 | WP_013023821 | type-F conjugative transfer system secretin TraK | traK |
| QDV37_RS03525 (QDV37_03525) | 71609..72175 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| QDV37_RS03530 (QDV37_03530) | 72195..72500 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| QDV37_RS03535 (QDV37_03535) | 72514..72882 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| QDV37_RS03540 (QDV37_03540) | 72951..73151 | - | 201 | WP_004194116 | TraY domain-containing protein | - |
| QDV37_RS03545 (QDV37_03545) | 73237..73938 | - | 702 | WP_004194113 | hypothetical protein | - |
| QDV37_RS03550 (QDV37_03550) | 74168..74560 | - | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDV37_RS03555 (QDV37_03555) | 74992..75477 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| QDV37_RS03560 (QDV37_03560) | 75510..75839 | - | 330 | WP_047066474 | DUF5983 family protein | - |
| QDV37_RS03565 (QDV37_03565) | 75872..76693 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| QDV37_RS03570 (QDV37_03570) | 77523..77936 | - | 414 | WP_023287139 | helix-turn-helix domain-containing protein | - |
| QDV37_RS03575 (QDV37_03575) | 77937..78215 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| QDV37_RS03580 (QDV37_03580) | 78205..78525 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDV37_RS03585 (QDV37_03585) | 78606..78830 | - | 225 | WP_014343499 | hypothetical protein | - |
| QDV37_RS03590 (QDV37_03590) | 78841..79053 | - | 213 | WP_019706020 | hypothetical protein | - |
| QDV37_RS03595 (QDV37_03595) | 79146..80126 | + | 981 | WP_000019445 | IS5-like element ISKpn26 family transposase | - |