T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 86644..107101
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JRC43_RS23975 (JRC43_23975) | 82483..82671 | - | 189 | WP_000957857 | hypothetical protein | - |
| JRC43_RS23980 (JRC43_23980) | 82788..83427 | + | 640 | Protein_108 | DUF932 domain-containing protein | - |
| JRC43_RS23985 (JRC43_23985) | 83725..84294 | - | 570 | Protein_109 | transglycosylase SLT domain-containing protein | - |
| JRC43_RS23990 (JRC43_23990) | 84648..85031 | + | 384 | WP_001151533 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JRC43_RS23995 (JRC43_23995) | 85223..85870 | + | 648 | WP_072855064 | conjugal transfer transcriptional regulator TraJ | - |
| JRC43_RS24000 (JRC43_24000) | 86006..86221 | + | 216 | WP_000086380 | conjugal transfer relaxosome protein TraY | - |
| JRC43_RS24005 (JRC43_24005) | 86264..86629 | + | 366 | WP_029397924 | type IV conjugative transfer system pilin TraA | - |
| JRC43_RS24010 (JRC43_24010) | 86644..86955 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| JRC43_RS24015 (JRC43_24015) | 86977..87543 | + | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| JRC43_RS24020 (JRC43_24020) | 87530..88258 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| JRC43_RS24025 (JRC43_24025) | 88258..89685 | + | 1428 | WP_208634883 | F-type conjugal transfer pilus assembly protein TraB | traB |
| JRC43_RS24030 (JRC43_24030) | 89675..90262 | + | 588 | WP_208634884 | conjugal transfer pilus-stabilizing protein TraP | - |
| JRC43_RS24035 (JRC43_24035) | 90249..90569 | + | 321 | WP_244259565 | conjugal transfer protein TrbD | - |
| JRC43_RS24040 (JRC43_24040) | 90566..91081 | + | 516 | WP_000724020 | type IV conjugative transfer system lipoprotein TraV | traV |
| JRC43_RS24045 (JRC43_24045) | 91216..91437 | + | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| JRC43_RS24050 (JRC43_24050) | 91597..94224 | + | 2628 | WP_208634886 | type IV secretion system protein TraC | virb4 |
| JRC43_RS24055 (JRC43_24055) | 94221..94607 | + | 387 | WP_208634887 | type-F conjugative transfer system protein TrbI | - |
| JRC43_RS24060 (JRC43_24060) | 94604..95236 | + | 633 | WP_208634888 | type-F conjugative transfer system protein TraW | traW |
| JRC43_RS24065 (JRC43_24065) | 95233..96225 | + | 993 | WP_000830839 | conjugal transfer pilus assembly protein TraU | traU |
| JRC43_RS24070 (JRC43_24070) | 96255..96560 | + | 306 | WP_137649262 | hypothetical protein | - |
| JRC43_RS24075 (JRC43_24075) | 96569..97207 | + | 639 | WP_033807960 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| JRC43_RS24080 (JRC43_24080) | 97204..97584 | + | 381 | WP_208634889 | hypothetical protein | - |
| JRC43_RS24085 (JRC43_24085) | 97820..99682 | + | 1863 | WP_244259566 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| JRC43_RS24090 (JRC43_24090) | 99709..99966 | + | 258 | WP_000864325 | conjugal transfer protein TrbE | - |
| JRC43_RS24095 (JRC43_24095) | 99959..100702 | + | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| JRC43_RS24100 (JRC43_24100) | 100718..101011 | + | 294 | WP_208634890 | conjugal transfer protein TrbA | - |
| JRC43_RS24105 (JRC43_24105) | 101067..101381 | - | 315 | WP_000415566 | protein ArtA | - |
| JRC43_RS24110 (JRC43_24110) | 101462..101746 | + | 285 | WP_000624109 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JRC43_RS24115 (JRC43_24115) | 101733..102278 | + | 546 | WP_021553231 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| JRC43_RS24120 (JRC43_24120) | 102208..102555 | + | 348 | WP_244259567 | P-type conjugative transfer protein TrbJ | - |
| JRC43_RS24125 (JRC43_24125) | 102536..102928 | + | 393 | WP_208634892 | F-type conjugal transfer protein TrbF | - |
| JRC43_RS24130 (JRC43_24130) | 102915..104288 | + | 1374 | WP_000944325 | conjugal transfer pilus assembly protein TraH | traH |
| JRC43_RS24135 (JRC43_24135) | 104285..107101 | + | 2817 | WP_099588200 | conjugal transfer mating-pair stabilization protein TraG | traG |