T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 45296..70476
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLR01_RS25565 (CLR01_25725) | 40393..40716 | + | 324 | WP_008324183 | hypothetical protein | - |
| CLR01_RS25570 (CLR01_25730) | 40778..41137 | + | 360 | WP_015493069 | hypothetical protein | - |
| CLR01_RS25575 (CLR01_25735) | 41764..42138 | + | 375 | WP_008324180 | hypothetical protein | - |
| CLR01_RS25580 (CLR01_25740) | 42192..42479 | + | 288 | WP_008324178 | hypothetical protein | - |
| CLR01_RS25585 (CLR01_25745) | 42526..42870 | + | 345 | WP_008324177 | hypothetical protein | - |
| CLR01_RS25590 (CLR01_25750) | 42956..43219 | + | 264 | WP_008324174 | hypothetical protein | - |
| CLR01_RS25595 (CLR01_25755) | 43262..44092 | + | 831 | WP_008324171 | N-6 DNA methylase | - |
| CLR01_RS25600 (CLR01_25760) | 44719..45249 | + | 531 | WP_008324170 | antirestriction protein | - |
| CLR01_RS25605 (CLR01_25765) | 45296..45772 | - | 477 | WP_008324168 | transglycosylase SLT domain-containing protein | virB1 |
| CLR01_RS25610 (CLR01_25770) | 46204..46596 | + | 393 | WP_008324167 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CLR01_RS25615 (CLR01_25775) | 46785..47474 | + | 690 | WP_008324166 | hypothetical protein | - |
| CLR01_RS25620 (CLR01_25780) | 47561..47785 | + | 225 | WP_008324165 | TraY domain-containing protein | - |
| CLR01_RS25625 (CLR01_25785) | 47843..48193 | + | 351 | WP_016247536 | type IV conjugative transfer system pilin TraA | - |
| CLR01_RS25630 (CLR01_25790) | 48344..48649 | + | 306 | WP_016479987 | type IV conjugative transfer system protein TraL | traL |
| CLR01_RS25635 (CLR01_25795) | 48664..49230 | + | 567 | WP_016247535 | type IV conjugative transfer system protein TraE | traE |
| CLR01_RS25640 (CLR01_25800) | 49217..49960 | + | 744 | WP_008324157 | type-F conjugative transfer system secretin TraK | traK |
| CLR01_RS25645 (CLR01_25805) | 49947..51341 | + | 1395 | WP_016479986 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CLR01_RS25650 (CLR01_25810) | 51363..51902 | + | 540 | WP_016247533 | type IV conjugative transfer system lipoprotein TraV | traV |
| CLR01_RS25655 (CLR01_25815) | 52022..52246 | + | 225 | WP_008324141 | TraR/DksA C4-type zinc finger protein | - |
| CLR01_RS25660 (CLR01_25820) | 52250..52435 | + | 186 | WP_008324139 | hypothetical protein | - |
| CLR01_RS25665 (CLR01_25825) | 52419..52820 | + | 402 | WP_016479985 | hypothetical protein | - |
| CLR01_RS25670 (CLR01_25830) | 52810..53376 | + | 567 | WP_008324135 | conjugal transfer pilus-stabilizing protein TraP | - |
| CLR01_RS25675 (CLR01_25835) | 53369..55999 | + | 2631 | WP_008324134 | type IV secretion system protein TraC | virb4 |
| CLR01_RS25680 (CLR01_25840) | 55996..56343 | + | 348 | WP_008324133 | type-F conjugative transfer system protein TrbI | - |
| CLR01_RS25685 (CLR01_25845) | 56343..56990 | + | 648 | WP_008324132 | type-F conjugative transfer system protein TraW | traW |
| CLR01_RS25690 (CLR01_25850) | 56993..57979 | + | 987 | WP_042934586 | conjugal transfer pilus assembly protein TraU | traU |
| CLR01_RS25695 (CLR01_25855) | 57996..58625 | + | 630 | WP_008324130 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CLR01_RS25700 (CLR01_25860) | 58622..60475 | + | 1854 | WP_016479983 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CLR01_RS25705 (CLR01_25865) | 60507..60695 | + | 189 | WP_008324128 | conjugal transfer protein TrbE | - |
| CLR01_RS25710 (CLR01_25870) | 60726..61475 | + | 750 | WP_008324127 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CLR01_RS25715 (CLR01_25875) | 61492..61740 | + | 249 | WP_016479982 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CLR01_RS25720 (CLR01_25880) | 61730..62284 | + | 555 | WP_008324125 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CLR01_RS25725 (CLR01_25885) | 62277..62705 | + | 429 | WP_008324122 | hypothetical protein | - |
| CLR01_RS25730 (CLR01_25890) | 62692..64062 | + | 1371 | WP_016247527 | conjugal transfer pilus assembly protein TraH | traH |
| CLR01_RS25735 (CLR01_25895) | 64062..66884 | + | 2823 | WP_008324119 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CLR01_RS25740 (CLR01_25900) | 66906..67337 | + | 432 | WP_008324118 | entry exclusion protein | - |
| CLR01_RS25745 | 67412..67750 | + | 339 | WP_032072912 | tetratricopeptide repeat protein | - |
| CLR01_RS25750 | 67758..68087 | + | 330 | WP_223856629 | hypothetical protein | - |
| CLR01_RS25755 (CLR01_25910) | 68221..70476 | + | 2256 | WP_075621255 | type IV conjugative transfer system coupling protein TraD | virb4 |