T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 15057..42331
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QM172_RS20255 | 10661..11458 | - | 798 | WP_015059991 | OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-48 | - |
| QM172_RS20260 | 11677..12374 | + | 698 | WP_095033700 | IS1-like element IS1B family transposase | - |
| QM172_RS20265 | 12371..13576 | + | 1206 | WP_025987686 | IS4-like element IS10A family transposase | - |
| QM172_RS20270 | 13591..14025 | - | 435 | Protein_17 | CPBP family intramembrane glutamate endopeptidase | - |
| QM172_RS20275 | 14138..14488 | + | 351 | WP_124065455 | DUF1496 domain-containing protein | - |
| QM172_RS20280 | 14593..14988 | + | 396 | WP_004187436 | lytic transglycosylase domain-containing protein | - |
| QM172_RS20285 | 15057..16295 | + | 1239 | WP_225373168 | conjugal transfer protein TrbA | trbA |
| QM172_RS20290 | 16306..17256 | + | 951 | WP_004206886 | DsbC family protein | trbB |
| QM172_RS20295 | 17269..19356 | + | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| QM172_RS20300 | 19407..19502 | - | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| QM172_RS20305 | 20725..21792 | - | 1068 | WP_019725043 | plasmid replication initiator RepA | - |
| QM172_RS20310 | 22076..22306 | - | 231 | WP_011091085 | IncL/M type plasmid replication protein RepC | - |
| QM172_RS20315 | 22387..23040 | - | 654 | WP_015060005 | hypothetical protein | - |
| QM172_RS20320 | 23042..25237 | - | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| QM172_RS20325 | 25230..25826 | - | 597 | WP_015060003 | hypothetical protein | - |
| QM172_RS20330 | 25823..27031 | - | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| QM172_RS20335 | 27028..30078 | - | 3051 | WP_004187482 | hypothetical protein | traU |
| QM172_RS20340 | 30075..30569 | - | 495 | WP_004187480 | hypothetical protein | - |
| QM172_RS20345 | 30615..31004 | - | 390 | WP_004187479 | DUF6750 family protein | traR |
| QM172_RS20350 | 31021..31551 | - | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| QM172_RS20355 | 31575..32279 | - | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| QM172_RS20360 | 32291..33640 | - | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| QM172_RS20365 | 33652..34803 | - | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| QM172_RS20370 | 34812..35525 | - | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| QM172_RS20375 | 35593..36003 | + | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| QM172_RS20380 | 36032..36187 | + | 156 | WP_172693602 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| QM172_RS20385 | 36188..36700 | - | 513 | WP_011091071 | hypothetical protein | traL |
| QM172_RS20390 | 36666..40103 | - | 3438 | WP_015586048 | LPD7 domain-containing protein | - |
| QM172_RS20395 | 40128..40388 | - | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| QM172_RS20400 | 40378..41541 | - | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| QM172_RS20405 | 41552..42331 | - | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| QM172_RS20410 | 42328..42828 | - | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| QM172_RS20415 | 42842..44821 | - | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| QM172_RS20420 | 44808..45335 | - | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| QM172_RS20425 | 45370..45765 | + | 396 | WP_019725163 | hypothetical protein | - |
| QM172_RS20430 | 46267..46803 | - | 537 | WP_004187332 | hypothetical protein | - |
| QM172_RS20435 | 46936..47247 | - | 312 | WP_004187333 | hypothetical protein | - |