T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 116516..145509
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFJ54_RS26420 (NFJ54_26380) | 116516..118798 | - | 2283 | WP_086625007 | type IV conjugative transfer system coupling protein TraD | virb4 |
| NFJ54_RS26425 (NFJ54_26385) | 118925..119614 | - | 690 | WP_162985117 | hypothetical protein | - |
| NFJ54_RS26430 (NFJ54_26390) | 119807..120538 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| NFJ54_RS26435 (NFJ54_26395) | 120731..121258 | - | 528 | WP_016528837 | conjugal transfer entry exclusion protein TraS | - |
| NFJ54_RS26440 (NFJ54_26400) | 121264..124113 | - | 2850 | WP_117242601 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NFJ54_RS26445 (NFJ54_26405) | 124113..125492 | - | 1380 | WP_279281575 | conjugal transfer pilus assembly protein TraH | traH |
| NFJ54_RS26450 (NFJ54_26410) | 125470..125913 | - | 444 | WP_094067299 | F-type conjugal transfer protein TrbF | - |
| NFJ54_RS26455 (NFJ54_26415) | 125959..126516 | - | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NFJ54_RS26460 (NFJ54_26420) | 126488..126727 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NFJ54_RS26465 (NFJ54_26425) | 126738..127490 | - | 753 | WP_029497422 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NFJ54_RS26470 (NFJ54_26430) | 127511..127837 | - | 327 | WP_279281576 | hypothetical protein | - |
| NFJ54_RS26475 (NFJ54_26435) | 127850..128098 | - | 249 | WP_004152675 | hypothetical protein | - |
| NFJ54_RS26480 (NFJ54_26440) | 128076..128330 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| NFJ54_RS26485 (NFJ54_26445) | 128362..130317 | - | 1956 | WP_075253038 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NFJ54_RS26490 (NFJ54_26450) | 130376..131014 | - | 639 | WP_015065635 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NFJ54_RS26495 (NFJ54_26455) | 131027..132016 | - | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| NFJ54_RS26500 (NFJ54_26460) | 132013..132414 | - | 402 | WP_004194979 | hypothetical protein | - |
| NFJ54_RS26505 (NFJ54_26465) | 132449..133084 | - | 636 | WP_029497419 | type-F conjugative transfer system protein TraW | traW |
| NFJ54_RS26510 (NFJ54_26470) | 133084..133473 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| NFJ54_RS26515 (NFJ54_26475) | 133473..136112 | - | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| NFJ54_RS26520 (NFJ54_26480) | 136184..136582 | - | 399 | WP_023179972 | hypothetical protein | - |
| NFJ54_RS26525 (NFJ54_26485) | 136764..136916 | - | 153 | WP_224518895 | hypothetical protein | - |
| NFJ54_RS26530 (NFJ54_26490) | 136959..137363 | - | 405 | WP_004197817 | hypothetical protein | - |
| NFJ54_RS26535 (NFJ54_26495) | 137430..137741 | - | 312 | WP_279281577 | hypothetical protein | - |
| NFJ54_RS26540 (NFJ54_26500) | 137742..137960 | - | 219 | WP_004195468 | hypothetical protein | - |
| NFJ54_RS26545 (NFJ54_26505) | 138283..138867 | - | 585 | WP_020277945 | type IV conjugative transfer system lipoprotein TraV | traV |
| NFJ54_RS26550 (NFJ54_26510) | 138890..139486 | - | 597 | WP_029497416 | conjugal transfer pilus-stabilizing protein TraP | - |
| NFJ54_RS26555 (NFJ54_26515) | 139479..140903 | - | 1425 | WP_004233801 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NFJ54_RS26560 (NFJ54_26520) | 140903..141643 | - | 741 | WP_014386193 | type-F conjugative transfer system secretin TraK | traK |
| NFJ54_RS26565 (NFJ54_26525) | 141630..142196 | - | 567 | WP_004152602 | type IV conjugative transfer system protein TraE | traE |
| NFJ54_RS26570 (NFJ54_26530) | 142216..142521 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| NFJ54_RS26575 (NFJ54_26535) | 142535..142903 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| NFJ54_RS26580 (NFJ54_26540) | 142965..143171 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| NFJ54_RS26585 (NFJ54_26545) | 143304..144023 | - | 720 | WP_075253039 | conjugal transfer protein TrbJ | - |
| NFJ54_RS26590 (NFJ54_26550) | 144223..144639 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NFJ54_RS26595 (NFJ54_26555) | 145102..145509 | + | 408 | WP_228728786 | transglycosylase SLT domain-containing protein | virB1 |
| NFJ54_RS26600 (NFJ54_26560) | 145547..146077 | - | 531 | WP_049070338 | antirestriction protein | - |
| NFJ54_RS26605 (NFJ54_26565) | 146269..146499 | + | 231 | WP_049070336 | hypothetical protein | - |
| NFJ54_RS26610 (NFJ54_26570) | 146737..147965 | + | 1229 | WP_089541817 | IS3 family transposase | - |
| NFJ54_RS26615 (NFJ54_26575) | 147936..148658 | - | 723 | WP_279281578 | IS6-like element IS26 family transposase | - |
| NFJ54_RS26620 (NFJ54_26580) | 148735..149661 | - | 927 | WP_001554380 | LysR family transcriptional regulator | - |