T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 12123..22448
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTC23_RS00045 (D647_p55009) | 7968..9401 | - | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |
| HTC23_RS00050 (D647_p55010) | 9500..9772 | + | 273 | Protein_10 | IS1 family transposase | - |
| HTC23_RS00055 (D647_p55011) | 9783..9989 | - | 207 | WP_001749967 | hypothetical protein | - |
| HTC23_RS00060 (D647_p55012) | 9994..10641 | - | 648 | WP_015344958 | restriction endonuclease | - |
| HTC23_RS00065 | 10691..10924 | - | 234 | WP_001191790 | hypothetical protein | - |
| HTC23_RS00070 (D647_p55013) | 11038..11352 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HTC23_RS00075 (D647_p55014) | 11349..11693 | - | 345 | WP_001749964 | hypothetical protein | - |
| HTC23_RS00080 (D647_p55015) | 11709..12080 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| HTC23_RS00085 (D647_p55016) | 12123..12857 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| HTC23_RS00090 (D647_p55017) | 12866..13147 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| HTC23_RS00095 (D647_p55018) | 13157..13450 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| HTC23_RS00100 (D647_p55019) | 13500..13817 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| HTC23_RS00105 (D647_p55020) | 13817..16417 | + | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HTC23_RS00110 (D647_p55021) | 16435..17148 | + | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| HTC23_RS00115 (D647_p55022) | 17156..17383 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| HTC23_RS00120 (D647_p55023) | 17399..18439 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| HTC23_RS00125 (D647_p55024) | 18510..18668 | + | 159 | WP_012561180 | hypothetical protein | - |
| HTC23_RS00130 (D647_p55025) | 18658..19356 | + | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| HTC23_RS00135 (D647_p55026) | 19367..20251 | + | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HTC23_RS00140 (D647_p55027) | 20251..21411 | + | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| HTC23_RS00145 (D647_p55028) | 21453..22448 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HTC23_RS00150 (D647_p55029) | 22448..22981 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| HTC23_RS00400 | 23155..23442 | - | 288 | Protein_31 | DUF6710 family protein | - |
| HTC23_RS00165 (D647_p55031) | 23709..23888 | + | 180 | Protein_32 | helix-turn-helix domain-containing protein | - |
| HTC23_RS00170 (D647_p55032) | 23953..24657 | + | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| HTC23_RS00175 (D647_p55033) | 25162..25818 | + | 657 | WP_001516695 | quinolone resistance pentapeptide repeat protein QnrS1 | - |
| HTC23_RS00180 (D647_p55034) | 26137..26751 | - | 615 | WP_014839983 | recombinase family protein | - |
| HTC23_RS00185 (D647_p55035) | 26913..27095 | + | 183 | Protein_36 | DUF4158 domain-containing protein | - |