T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43039..62328
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN54_RS29270 (LNN54_29275) | 38123..38434 | + | 312 | WP_004187333 | hypothetical protein | - |
| LNN54_RS29275 (LNN54_29280) | 38567..39103 | + | 537 | WP_004187332 | hypothetical protein | - |
| LNN54_RS29280 (LNN54_29285) | 39605..40000 | - | 396 | WP_019725163 | hypothetical protein | - |
| LNN54_RS29285 (LNN54_29290) | 40035..40562 | + | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| LNN54_RS29290 (LNN54_29295) | 40549..42528 | + | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| LNN54_RS29295 (LNN54_29300) | 42542..43042 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| LNN54_RS29300 (LNN54_29305) | 43039..43818 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| LNN54_RS29305 (LNN54_29310) | 43829..44992 | + | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| LNN54_RS29310 (LNN54_29315) | 44982..45242 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| LNN54_RS29315 (LNN54_29320) | 45267..48704 | + | 3438 | WP_015586048 | LPD7 domain-containing protein | - |
| LNN54_RS29320 (LNN54_29325) | 48670..49182 | + | 513 | WP_011091071 | hypothetical protein | traL |
| LNN54_RS29325 (LNN54_29330) | 49183..49395 | - | 213 | WP_305953721 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| LNN54_RS29330 (LNN54_29335) | 49367..49777 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| LNN54_RS29335 (LNN54_29340) | 49845..50558 | + | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| LNN54_RS29340 (LNN54_29345) | 50567..51718 | + | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| LNN54_RS29345 (LNN54_29350) | 51730..53079 | + | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| LNN54_RS29350 (LNN54_29355) | 53091..53795 | + | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| LNN54_RS29355 (LNN54_29360) | 53819..54349 | + | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| LNN54_RS29360 (LNN54_29365) | 54366..54755 | + | 390 | WP_004187479 | DUF6750 family protein | traR |
| LNN54_RS29365 (LNN54_29370) | 54801..55295 | + | 495 | WP_004187480 | hypothetical protein | - |
| LNN54_RS29370 (LNN54_29375) | 55292..58342 | + | 3051 | WP_004187482 | hypothetical protein | traU |
| LNN54_RS29375 (LNN54_29380) | 58339..59547 | + | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| LNN54_RS29380 (LNN54_29385) | 59544..60140 | + | 597 | WP_032419542 | hypothetical protein | - |
| LNN54_RS29385 (LNN54_29390) | 60133..62328 | + | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| LNN54_RS29390 (LNN54_29395) | 62330..62983 | + | 654 | WP_015060005 | hypothetical protein | - |
| LNN54_RS29395 (LNN54_29400) | 63064..63294 | + | 231 | WP_011091085 | IncL/M type plasmid replication protein RepC | - |