T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 194584..224598
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN59_RS27610 (LNN59_27610) | 194584..196896 | - | 2313 | WP_015065541 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LNN59_RS27615 (LNN59_27615) | 197025..197714 | - | 690 | WP_015065540 | hypothetical protein | - |
| LNN59_RS27620 (LNN59_27620) | 197906..198637 | - | 732 | WP_032329926 | conjugal transfer complement resistance protein TraT | - |
| LNN59_RS27625 (LNN59_27625) | 198946..199470 | - | 525 | WP_015065538 | hypothetical protein | - |
| LNN59_RS27630 (LNN59_27630) | 199481..202324 | - | 2844 | WP_023157999 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LNN59_RS27635 (LNN59_27635) | 202324..203703 | - | 1380 | WP_023158000 | conjugal transfer pilus assembly protein TraH | traH |
| LNN59_RS27640 (LNN59_27640) | 203681..204124 | - | 444 | WP_023158001 | F-type conjugal transfer protein TrbF | - |
| LNN59_RS27645 (LNN59_27645) | 204170..204727 | - | 558 | WP_023158002 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LNN59_RS27650 (LNN59_27650) | 204699..204938 | - | 240 | WP_023158003 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LNN59_RS27655 (LNN59_27655) | 204949..205701 | - | 753 | WP_015065535 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LNN59_RS27660 (LNN59_27660) | 205722..206048 | - | 327 | WP_015065534 | hypothetical protein | - |
| LNN59_RS27665 (LNN59_27665) | 206061..206309 | - | 249 | WP_004152675 | hypothetical protein | - |
| LNN59_RS27670 (LNN59_27670) | 206287..206541 | - | 255 | WP_015065558 | conjugal transfer protein TrbE | - |
| LNN59_RS27675 (LNN59_27675) | 206573..208528 | - | 1956 | WP_015065533 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LNN59_RS27680 (LNN59_27680) | 208587..209234 | - | 648 | WP_231547695 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LNN59_RS27685 (LNN59_27685) | 209313..209489 | - | 177 | WP_162866177 | hypothetical protein | - |
| LNN59_RS27690 (LNN59_27690) | 209510..210499 | - | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| LNN59_RS27695 (LNN59_27695) | 210496..210897 | - | 402 | WP_023158005 | hypothetical protein | - |
| LNN59_RS27700 (LNN59_27700) | 210932..211567 | - | 636 | WP_023158006 | type-F conjugative transfer system protein TraW | traW |
| LNN59_RS27705 (LNN59_27705) | 211567..211956 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| LNN59_RS27710 (LNN59_27710) | 211956..214595 | - | 2640 | WP_023158007 | type IV secretion system protein TraC | virb4 |
| LNN59_RS27715 (LNN59_27715) | 214667..215065 | - | 399 | WP_023158008 | hypothetical protein | - |
| LNN59_RS27720 (LNN59_27720) | 215073..215462 | - | 390 | WP_023158009 | hypothetical protein | - |
| LNN59_RS27725 (LNN59_27725) | 215505..215909 | - | 405 | WP_016831042 | hypothetical protein | - |
| LNN59_RS27730 (LNN59_27730) | 215976..216287 | - | 312 | WP_014386200 | hypothetical protein | - |
| LNN59_RS27735 (LNN59_27735) | 216288..216506 | - | 219 | WP_014386199 | hypothetical protein | - |
| LNN59_RS27740 (LNN59_27740) | 216530..216819 | - | 290 | Protein_229 | hypothetical protein | - |
| LNN59_RS27745 (LNN59_27745) | 216824..217234 | - | 411 | WP_016831039 | hypothetical protein | - |
| LNN59_RS27750 (LNN59_27750) | 217366..217950 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| LNN59_RS27755 (LNN59_27755) | 217973..218569 | - | 597 | Protein_232 | conjugal transfer pilus-stabilizing protein TraP | - |
| LNN59_RS27760 (LNN59_27760) | 218562..219986 | - | 1425 | WP_023158013 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LNN59_RS27765 (LNN59_27765) | 219986..220726 | - | 741 | WP_014386193 | type-F conjugative transfer system secretin TraK | traK |
| LNN59_RS27770 (LNN59_27770) | 220713..221279 | - | 567 | WP_016831035 | type IV conjugative transfer system protein TraE | traE |
| LNN59_RS27775 (LNN59_27775) | 221299..221604 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LNN59_RS27780 (LNN59_27780) | 221618..221986 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LNN59_RS27785 (LNN59_27785) | 222048..222254 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| LNN59_RS27790 (LNN59_27790) | 222387..223106 | - | 720 | WP_016831034 | conjugal transfer protein TrbJ | - |
| LNN59_RS27795 (LNN59_27795) | 223306..223722 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LNN59_RS27800 (LNN59_27800) | 224113..224598 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| LNN59_RS27805 (LNN59_27805) | 224631..224960 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| LNN59_RS27810 (LNN59_27810) | 224993..225814 | - | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| LNN59_RS27815 (LNN59_27815) | 226642..227205 | - | 564 | WP_004182054 | methyltransferase | - |
| LNN59_RS27820 (LNN59_27820) | 227253..228608 | - | 1356 | WP_004182052 | DUF3560 domain-containing protein | - |
| LNN59_RS27825 (LNN59_27825) | 228660..228890 | - | 231 | WP_001568051 | hypothetical protein | - |
| LNN59_RS27830 (LNN59_27830) | 228982..229209 | - | 228 | WP_004182050 | hypothetical protein | - |