T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 15388..25713
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTC05_RS00075 (D616_p156015) | 11233..12666 | - | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |
| HTC05_RS00080 (D616_p156016) | 12765..13037 | + | 273 | Protein_16 | IS1 family transposase | - |
| HTC05_RS00085 (D616_p156017) | 13048..13254 | - | 207 | WP_001749967 | hypothetical protein | - |
| HTC05_RS00090 (D616_p156018) | 13259..13906 | - | 648 | WP_015344958 | restriction endonuclease | - |
| HTC05_RS00095 (D616_p156019) | 13956..14189 | - | 234 | WP_001191790 | hypothetical protein | - |
| HTC05_RS00100 (D616_p156020) | 14303..14617 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HTC05_RS00105 (D616_p156021) | 14614..14958 | - | 345 | WP_001749964 | hypothetical protein | - |
| HTC05_RS00110 (D616_p156022) | 14974..15345 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| HTC05_RS00115 (D616_p156023) | 15388..16122 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| HTC05_RS00120 (D616_p156024) | 16131..16412 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| HTC05_RS00125 (D616_p156025) | 16422..16715 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| HTC05_RS00130 (D616_p156026) | 16765..17082 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| HTC05_RS00135 (D616_p156027) | 17082..19682 | + | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HTC05_RS00140 (D616_p156028) | 19700..20413 | + | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| HTC05_RS00145 (D616_p156029) | 20421..20648 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| HTC05_RS00150 (D616_p156030) | 20664..21704 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| HTC05_RS00155 (D616_p156031) | 21775..21933 | + | 159 | WP_012561180 | hypothetical protein | - |
| HTC05_RS00160 (D616_p156032) | 21923..22621 | + | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| HTC05_RS00165 (D616_p156033) | 22632..23516 | + | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HTC05_RS00170 (D616_p156034) | 23516..24676 | + | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| HTC05_RS00175 (D616_p156035) | 24718..25713 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HTC05_RS00180 (D616_p156036) | 25713..26246 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| HTC05_RS00185 (D616_p156037) | 26420..26548 | - | 129 | WP_002210551 | DUF6710 family protein | - |
| HTC05_RS00200 (D616_p156041) | 27804..29195 | - | 1392 | WP_014839878 | ISKra4-like element ISKpn19 family transposase | - |
| HTC05_RS00205 (D616_p156042) | 29232..29804 | - | 573 | WP_001493762 | recombinase family protein | - |
| HTC05_RS00210 (D616_p156043) | 29941..30486 | - | 546 | WP_001493763 | plasmid pRiA4b ORF-3 family protein | - |