T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43039..62328
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN40_RS29440 (LNN40_29445) | 38123..38434 | + | 312 | WP_004187333 | hypothetical protein | - |
| LNN40_RS29445 (LNN40_29450) | 38567..39103 | + | 537 | WP_004187332 | hypothetical protein | - |
| LNN40_RS29450 (LNN40_29455) | 39605..40000 | - | 396 | WP_019725163 | hypothetical protein | - |
| LNN40_RS29455 (LNN40_29460) | 40035..40562 | + | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| LNN40_RS29460 (LNN40_29465) | 40549..42528 | + | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| LNN40_RS29465 (LNN40_29470) | 42542..43042 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| LNN40_RS29470 (LNN40_29475) | 43039..43818 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| LNN40_RS29475 (LNN40_29480) | 43829..44992 | + | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| LNN40_RS29480 (LNN40_29485) | 44982..45242 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| LNN40_RS29485 (LNN40_29490) | 45267..48704 | + | 3438 | WP_015586048 | LPD7 domain-containing protein | - |
| LNN40_RS29490 (LNN40_29495) | 48670..49182 | + | 513 | WP_011091071 | hypothetical protein | traL |
| LNN40_RS29495 (LNN40_29500) | 49183..49395 | - | 213 | WP_305953721 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| LNN40_RS29500 (LNN40_29505) | 49367..49777 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| LNN40_RS29505 (LNN40_29510) | 49845..50558 | + | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| LNN40_RS29510 (LNN40_29515) | 50567..51718 | + | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| LNN40_RS29515 (LNN40_29520) | 51730..53079 | + | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| LNN40_RS29520 (LNN40_29525) | 53091..53795 | + | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| LNN40_RS29525 (LNN40_29530) | 53819..54349 | + | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| LNN40_RS29530 (LNN40_29535) | 54366..54755 | + | 390 | WP_004187479 | DUF6750 family protein | traR |
| LNN40_RS29535 (LNN40_29540) | 54801..55295 | + | 495 | WP_004187480 | hypothetical protein | - |
| LNN40_RS29540 (LNN40_29545) | 55292..58342 | + | 3051 | WP_004187482 | hypothetical protein | traU |
| LNN40_RS29545 (LNN40_29550) | 58339..59547 | + | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| LNN40_RS29550 (LNN40_29555) | 59544..60140 | + | 597 | WP_032419542 | hypothetical protein | - |
| LNN40_RS29555 (LNN40_29560) | 60133..62328 | + | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| LNN40_RS29560 (LNN40_29565) | 62330..62983 | + | 654 | WP_015060005 | hypothetical protein | - |
| LNN40_RS29565 (LNN40_29570) | 63064..63294 | + | 231 | WP_011091085 | IncL/M type plasmid replication protein RepC | - |