T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 102063..130484
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN40_RS28370 (LNN40_28375) | 102063..104375 | - | 2313 | WP_031944110 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LNN40_RS28375 (LNN40_28380) | 104735..105466 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| LNN40_RS28380 (LNN40_28385) | 105656..106183 | - | 528 | WP_004153030 | hypothetical protein | - |
| LNN40_RS28385 (LNN40_28390) | 106189..109038 | - | 2850 | WP_004178054 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LNN40_RS28390 (LNN40_28395) | 109038..110408 | - | 1371 | WP_004178055 | conjugal transfer pilus assembly protein TraH | traH |
| LNN40_RS28395 (LNN40_28400) | 110395..110823 | - | 429 | WP_004152689 | hypothetical protein | - |
| LNN40_RS28400 (LNN40_28405) | 110816..111388 | - | 573 | WP_004152688 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LNN40_RS28405 (LNN40_28410) | 111360..111599 | - | 240 | WP_004152687 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LNN40_RS28410 (LNN40_28415) | 111610..112362 | - | 753 | WP_004152686 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LNN40_RS28415 (LNN40_28420) | 112383..112709 | - | 327 | WP_004152685 | hypothetical protein | - |
| LNN40_RS29795 | 112755..112940 | - | 186 | WP_004152684 | hypothetical protein | - |
| LNN40_RS28420 (LNN40_28425) | 112937..113173 | - | 237 | WP_004152683 | conjugal transfer protein TrbE | - |
| LNN40_RS28425 (LNN40_28430) | 113205..115160 | - | 1956 | WP_004153093 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LNN40_RS28430 (LNN40_28435) | 115208..115846 | - | 639 | WP_004152682 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LNN40_RS28435 (LNN40_28440) | 115859..116818 | - | 960 | WP_015065634 | conjugal transfer pilus assembly protein TraU | traU |
| LNN40_RS28440 (LNN40_28445) | 116862..117488 | - | 627 | WP_004152590 | type-F conjugative transfer system protein TraW | traW |
| LNN40_RS28445 (LNN40_28450) | 117488..117877 | - | 390 | WP_004152591 | type-F conjugative transfer system protein TrbI | - |
| LNN40_RS28450 (LNN40_28455) | 117877..120516 | - | 2640 | WP_004152592 | type IV secretion system protein TraC | virb4 |
| LNN40_RS28455 (LNN40_28460) | 120588..120986 | - | 399 | WP_004153071 | hypothetical protein | - |
| LNN40_RS28460 (LNN40_28465) | 121282..121686 | - | 405 | WP_031944109 | hypothetical protein | - |
| LNN40_RS28465 (LNN40_28470) | 121753..122070 | - | 318 | WP_004152595 | hypothetical protein | - |
| LNN40_RS28470 (LNN40_28475) | 122071..122289 | - | 219 | WP_004171484 | hypothetical protein | - |
| LNN40_RS28475 (LNN40_28480) | 122313..122603 | - | 291 | WP_004152596 | hypothetical protein | - |
| LNN40_RS28480 (LNN40_28485) | 122608..123018 | - | 411 | WP_004152597 | lipase chaperone | - |
| LNN40_RS28485 (LNN40_28490) | 123150..123719 | - | 570 | WP_004152598 | type IV conjugative transfer system lipoprotein TraV | traV |
| LNN40_RS28490 (LNN40_28495) | 123742..124338 | - | 597 | WP_004152599 | conjugal transfer pilus-stabilizing protein TraP | - |
| LNN40_RS28495 (LNN40_28500) | 124331..125755 | - | 1425 | WP_004152600 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LNN40_RS28500 (LNN40_28505) | 125755..126495 | - | 741 | WP_004152601 | type-F conjugative transfer system secretin TraK | traK |
| LNN40_RS28505 (LNN40_28510) | 126482..127048 | - | 567 | WP_004152602 | type IV conjugative transfer system protein TraE | traE |
| LNN40_RS28510 (LNN40_28515) | 127068..127373 | - | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| LNN40_RS28515 (LNN40_28520) | 127387..127755 | - | 369 | WP_004178060 | type IV conjugative transfer system pilin TraA | - |
| LNN40_RS28520 (LNN40_28525) | 127809..128180 | - | 372 | WP_004208838 | TraY domain-containing protein | - |
| LNN40_RS28525 (LNN40_28530) | 128264..128959 | - | 696 | WP_004178061 | transcriptional regulator TraJ family protein | - |
| LNN40_RS28530 (LNN40_28535) | 129173..129565 | - | 393 | WP_004178062 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LNN40_RS28535 (LNN40_28540) | 129999..130484 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| LNN40_RS28540 (LNN40_28545) | 130517..130846 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| LNN40_RS28545 (LNN40_28550) | 130879..131700 | - | 822 | WP_004178064 | DUF932 domain-containing protein | - |
| LNN40_RS28550 (LNN40_28555) | 132007..132975 | + | 969 | WP_073970534 | IS5 family transposase | - |
| LNN40_RS28555 (LNN40_28560) | 133600..134013 | - | 414 | WP_004152722 | helix-turn-helix domain-containing protein | - |
| LNN40_RS28560 (LNN40_28565) | 134014..134292 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| LNN40_RS28565 (LNN40_28570) | 134282..134602 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LNN40_RS28570 (LNN40_28575) | 134683..134907 | - | 225 | WP_004152719 | hypothetical protein | - |
| LNN40_RS28575 (LNN40_28580) | 134918..135130 | - | 213 | WP_004152718 | hypothetical protein | - |