T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 194282..224296
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN48_RS27610 (LNN48_27610) | 194282..196594 | - | 2313 | WP_015065541 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LNN48_RS27615 (LNN48_27615) | 196723..197412 | - | 690 | WP_015065540 | hypothetical protein | - |
| LNN48_RS27620 (LNN48_27620) | 197604..198335 | - | 732 | WP_032329926 | conjugal transfer complement resistance protein TraT | - |
| LNN48_RS27625 (LNN48_27625) | 198644..199168 | - | 525 | WP_015065538 | hypothetical protein | - |
| LNN48_RS27630 (LNN48_27630) | 199179..202022 | - | 2844 | WP_023157999 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LNN48_RS27635 (LNN48_27635) | 202022..203401 | - | 1380 | WP_023158000 | conjugal transfer pilus assembly protein TraH | traH |
| LNN48_RS27640 (LNN48_27640) | 203379..203822 | - | 444 | WP_023158001 | F-type conjugal transfer protein TrbF | - |
| LNN48_RS27645 (LNN48_27645) | 203868..204425 | - | 558 | WP_023158002 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LNN48_RS27650 (LNN48_27650) | 204397..204636 | - | 240 | WP_023158003 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LNN48_RS27655 (LNN48_27655) | 204647..205399 | - | 753 | WP_015065535 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LNN48_RS27660 (LNN48_27660) | 205420..205746 | - | 327 | WP_015065534 | hypothetical protein | - |
| LNN48_RS27665 (LNN48_27665) | 205759..206007 | - | 249 | WP_004152675 | hypothetical protein | - |
| LNN48_RS27670 (LNN48_27670) | 205985..206239 | - | 255 | WP_015065558 | conjugal transfer protein TrbE | - |
| LNN48_RS27675 (LNN48_27675) | 206271..208226 | - | 1956 | WP_015065533 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LNN48_RS27680 (LNN48_27680) | 208285..208932 | - | 648 | WP_231547695 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LNN48_RS27685 (LNN48_27685) | 209011..209187 | - | 177 | WP_162866177 | hypothetical protein | - |
| LNN48_RS27690 (LNN48_27690) | 209208..210197 | - | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| LNN48_RS27695 (LNN48_27695) | 210194..210595 | - | 402 | WP_023158005 | hypothetical protein | - |
| LNN48_RS27700 (LNN48_27700) | 210630..211265 | - | 636 | WP_023158006 | type-F conjugative transfer system protein TraW | traW |
| LNN48_RS27705 (LNN48_27705) | 211265..211654 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| LNN48_RS27710 (LNN48_27710) | 211654..214293 | - | 2640 | WP_023158007 | type IV secretion system protein TraC | virb4 |
| LNN48_RS27715 (LNN48_27715) | 214365..214763 | - | 399 | WP_023158008 | hypothetical protein | - |
| LNN48_RS27720 (LNN48_27720) | 214771..215160 | - | 390 | WP_023158009 | hypothetical protein | - |
| LNN48_RS27725 (LNN48_27725) | 215203..215607 | - | 405 | WP_016831042 | hypothetical protein | - |
| LNN48_RS27730 (LNN48_27730) | 215674..215985 | - | 312 | WP_014386200 | hypothetical protein | - |
| LNN48_RS27735 (LNN48_27735) | 215986..216204 | - | 219 | WP_014386199 | hypothetical protein | - |
| LNN48_RS27740 (LNN48_27740) | 216228..216517 | - | 290 | Protein_229 | hypothetical protein | - |
| LNN48_RS27745 (LNN48_27745) | 216522..216932 | - | 411 | WP_016831039 | hypothetical protein | - |
| LNN48_RS27750 (LNN48_27750) | 217064..217648 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| LNN48_RS27755 (LNN48_27755) | 217671..218267 | - | 597 | Protein_232 | conjugal transfer pilus-stabilizing protein TraP | - |
| LNN48_RS27760 (LNN48_27760) | 218260..219684 | - | 1425 | WP_023158013 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LNN48_RS27765 (LNN48_27765) | 219684..220424 | - | 741 | WP_014386193 | type-F conjugative transfer system secretin TraK | traK |
| LNN48_RS27770 (LNN48_27770) | 220411..220977 | - | 567 | WP_016831035 | type IV conjugative transfer system protein TraE | traE |
| LNN48_RS27775 (LNN48_27775) | 220997..221302 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LNN48_RS27780 (LNN48_27780) | 221316..221684 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LNN48_RS27785 (LNN48_27785) | 221746..221952 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| LNN48_RS27790 (LNN48_27790) | 222085..222804 | - | 720 | WP_016831034 | conjugal transfer protein TrbJ | - |
| LNN48_RS27795 (LNN48_27795) | 223004..223420 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LNN48_RS27800 (LNN48_27800) | 223811..224296 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| LNN48_RS27805 (LNN48_27805) | 224329..224658 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| LNN48_RS27810 (LNN48_27810) | 224691..225512 | - | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| LNN48_RS27815 (LNN48_27815) | 226340..226903 | - | 564 | WP_004182054 | methyltransferase | - |
| LNN48_RS27820 (LNN48_27820) | 226951..228306 | - | 1356 | WP_004182052 | DUF3560 domain-containing protein | - |
| LNN48_RS27825 (LNN48_27825) | 228358..228588 | - | 231 | WP_001568051 | hypothetical protein | - |
| LNN48_RS27830 (LNN48_27830) | 228680..228907 | - | 228 | WP_004182050 | hypothetical protein | - |