T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 109425..135852
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTC56_RS00500 (D616_p153128) | 105683..106117 | + | 435 | WP_000845962 | conjugation system SOS inhibitor PsiB | - |
| HTC56_RS00505 (D616_p153129) | 106114..106876 | + | 763 | Protein_103 | plasmid SOS inhibition protein A | - |
| HTC56_RS00510 (D616_p153130) | 106854..107033 | - | 180 | WP_001334662 | hypothetical protein | - |
| HTC56_RS00830 | 107055..107204 | + | 150 | Protein_105 | plasmid maintenance protein Mok | - |
| HTC56_RS00515 (D616_p153131) | 107146..107271 | + | 126 | WP_096937776 | type I toxin-antitoxin system Hok family toxin | - |
| HTC56_RS00835 | 107572..107845 | - | 274 | Protein_107 | hypothetical protein | - |
| HTC56_RS00520 (D616_p153133) | 107897..108193 | + | 297 | WP_001272245 | hypothetical protein | - |
| HTC56_RS00525 (D616_p153134) | 108304..109125 | + | 822 | WP_001234487 | DUF932 domain-containing protein | - |
| HTC56_RS00530 (D616_p153136) | 109425..110027 | - | 603 | WP_000243712 | transglycosylase SLT domain-containing protein | virB1 |
| HTC56_RS00535 (D616_p153137) | 110348..110731 | + | 384 | WP_001151524 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HTC56_RS00540 (D616_p153138) | 110918..111607 | + | 690 | WP_000283385 | conjugal transfer transcriptional regulator TraJ | - |
| HTC56_RS00545 (D616_p153139) | 111706..112101 | + | 396 | WP_001309237 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| HTC56_RS00550 (D616_p153140) | 112134..112499 | + | 366 | WP_000994779 | type IV conjugative transfer system pilin TraA | - |
| HTC56_RS00555 (D616_p153141) | 112514..112825 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| HTC56_RS00560 (D616_p153142) | 112847..113413 | + | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| HTC56_RS00565 (D616_p153143) | 113400..114128 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| HTC56_RS00570 (D616_p153144) | 114128..115555 | + | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HTC56_RS00575 (D616_p153145) | 115545..116135 | + | 591 | WP_000002787 | conjugal transfer pilus-stabilizing protein TraP | - |
| HTC56_RS00580 (D616_p153146) | 116122..116319 | + | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| HTC56_RS00585 (D616_p153147) | 116331..116582 | + | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| HTC56_RS00590 (D616_p153148) | 116579..117094 | + | 516 | WP_000809838 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTC56_RS00595 (D616_p153149) | 117229..117450 | + | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| HTC56_RS00600 (D616_p153151) | 117610..120237 | + | 2628 | WP_001064248 | type IV secretion system protein TraC | virb4 |
| HTC56_RS00605 (D616_p153152) | 120234..120620 | + | 387 | WP_032072879 | type-F conjugative transfer system protein TrbI | - |
| HTC56_RS00610 (D616_p153153) | 120617..121249 | + | 633 | WP_032072880 | type-F conjugative transfer system protein TraW | traW |
| HTC56_RS00615 (D616_p153154) | 121246..122238 | + | 993 | WP_000830180 | conjugal transfer pilus assembly protein TraU | traU |
| HTC56_RS00620 (D616_p153155) | 122247..122885 | + | 639 | WP_000777695 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HTC56_RS00625 (D616_p153156) | 122882..124690 | + | 1809 | WP_000821849 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HTC56_RS00630 (D616_p153157) | 124717..124974 | + | 258 | WP_000864318 | conjugal transfer protein TrbE | - |
| HTC56_RS00635 (D616_p153158) | 124967..125710 | + | 744 | WP_001030377 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HTC56_RS00640 (D616_p153159) | 125726..126073 | + | 348 | WP_001287910 | conjugal transfer protein TrbA | - |
| HTC56_RS00645 (D616_p153160) | 126075..126389 | - | 315 | WP_000415566 | protein ArtA | - |
| HTC56_RS00650 (D616_p153161) | 126470..126754 | + | 285 | WP_000624109 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HTC56_RS00655 (D616_p153162) | 126741..127286 | + | 546 | WP_000059851 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HTC56_RS00660 (D616_p153163) | 127216..127557 | + | 342 | WP_001443031 | P-type conjugative transfer protein TrbJ | - |
| HTC56_RS00665 (D616_p153164) | 127544..127924 | + | 381 | WP_001680290 | F-type conjugal transfer protein TrbF | - |
| HTC56_RS00670 (D616_p153165) | 127924..129297 | + | 1374 | WP_001517790 | conjugal transfer pilus assembly protein TraH | traH |
| HTC56_RS00675 (D616_p153166) | 129294..132116 | + | 2823 | WP_001007018 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HTC56_RS00680 | 132132..132629 | + | 498 | WP_000605858 | hypothetical protein | - |
| HTC56_RS00685 (D616_p153167) | 132661..133392 | + | 732 | WP_023565183 | conjugal transfer complement resistance protein TraT | - |
| HTC56_RS00690 (D616_p153169) | 133645..135852 | + | 2208 | WP_021526192 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HTC56_RS00695 (D616_p153170) | 135861..136259 | - | 399 | WP_000911313 | type II toxin-antitoxin system VapC family toxin | - |
| HTC56_RS00700 (D616_p153171) | 136259..136486 | - | 228 | WP_000450520 | toxin-antitoxin system antitoxin VapB | - |