T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 32685..55650
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN50_RS25715 (LNN50_25720) | 28125..29249 | - | 1125 | WP_000486720 | site-specific integrase | - |
| LNN50_RS26460 | 29662..29883 | - | 222 | Protein_39 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| LNN50_RS25720 (LNN50_25725) | 30750..32033 | - | 1284 | WP_048238078 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| LNN50_RS25725 (LNN50_25730) | 32046..32681 | - | 636 | WP_000934978 | A24 family peptidase | - |
| LNN50_RS25730 (LNN50_25735) | 32685..33167 | - | 483 | WP_001258095 | lytic transglycosylase domain-containing protein | virB1 |
| LNN50_RS25735 (LNN50_25740) | 33234..33791 | - | 558 | WP_000095048 | type 4 pilus major pilin | - |
| LNN50_RS25740 (LNN50_25745) | 33836..34945 | - | 1110 | WP_000974903 | type II secretion system F family protein | - |
| LNN50_RS25745 (LNN50_25750) | 34936..36474 | - | 1539 | WP_000466225 | ATPase, T2SS/T4P/T4SS family | virB11 |
| LNN50_RS25750 (LNN50_25755) | 36499..36993 | - | 495 | WP_000912554 | type IV pilus biogenesis protein PilP | - |
| LNN50_RS25755 (LNN50_25760) | 36977..38287 | - | 1311 | WP_001454111 | type 4b pilus protein PilO2 | - |
| LNN50_RS25760 (LNN50_25765) | 38338..39981 | - | 1644 | WP_001035589 | PilN family type IVB pilus formation outer membrane protein | - |
| LNN50_RS25765 (LNN50_25770) | 40032..41990 | - | 1959 | WP_000338972 | type IV secretory system conjugative DNA transfer family protein | - |
| LNN50_RS25770 (LNN50_25775) | 42006..43061 | - | 1056 | WP_001059977 | P-type DNA transfer ATPase VirB11 | virB11 |
| LNN50_RS25775 (LNN50_25780) | 43104..44243 | - | 1140 | WP_000790639 | TrbI/VirB10 family protein | virB10 |
| LNN50_RS25780 (LNN50_25785) | 44233..44934 | - | 702 | WP_000274524 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| LNN50_RS25785 (LNN50_25790) | 45000..45734 | - | 735 | WP_000432283 | type IV secretion system protein | virB8 |
| LNN50_RS25790 (LNN50_25795) | 45900..48257 | - | 2358 | WP_000548951 | VirB4 family type IV secretion system protein | virb4 |
| LNN50_RS25795 (LNN50_25800) | 48263..48583 | - | 321 | WP_000362083 | VirB3 family type IV secretion system protein | virB3 |
| LNN50_RS25800 (LNN50_25805) | 48654..48944 | - | 291 | WP_000865478 | TrbC/VirB2 family protein | virB2 |
| LNN50_RS25805 (LNN50_25810) | 48944..49528 | - | 585 | WP_001177114 | lytic transglycosylase domain-containing protein | virB1 |
| LNN50_RS25810 (LNN50_25815) | 49549..49947 | - | 399 | WP_001153669 | hypothetical protein | - |
| LNN50_RS25815 (LNN50_25820) | 50066..50503 | - | 438 | WP_000539665 | type IV pilus biogenesis protein PilM | - |
| LNN50_RS25820 (LNN50_25825) | 50509..51744 | - | 1236 | WP_000733393 | toxin co-regulated pilus biosynthesis Q family protein | - |
| LNN50_RS25825 (LNN50_25830) | 51747..52034 | - | 288 | WP_001326593 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LNN50_RS25830 (LNN50_25835) | 52206..52841 | - | 636 | WP_000835769 | hypothetical protein | - |
| LNN50_RS25835 (LNN50_25840) | 52889..53698 | + | 810 | WP_001005154 | DUF5710 domain-containing protein | - |
| LNN50_RS25840 (LNN50_25845) | 53751..54005 | - | 255 | WP_000609210 | EexN family lipoprotein | - |
| LNN50_RS25845 (LNN50_25850) | 54008..54649 | - | 642 | WP_001415805 | type IV secretion system protein | - |
| LNN50_RS25850 (LNN50_25855) | 54655..55650 | - | 996 | WP_000276068 | type IV secretion system protein | virB6 |
| LNN50_RS25855 (LNN50_25860) | 55654..55911 | - | 258 | WP_000739144 | hypothetical protein | - |
| LNN50_RS25860 (LNN50_25865) | 55908..56210 | - | 303 | WP_000189499 | hypothetical protein | - |
| LNN50_RS25865 (LNN50_25870) | 56424..57017 | - | 594 | WP_001243171 | hypothetical protein | - |
| LNN50_RS25870 (LNN50_25875) | 57168..57830 | - | 663 | WP_001243159 | hypothetical protein | - |
| LNN50_RS25875 (LNN50_25880) | 57841..58011 | - | 171 | WP_000550721 | hypothetical protein | - |
| LNN50_RS25880 (LNN50_25885) | 58015..58458 | - | 444 | WP_000498521 | NfeD family protein | - |
| LNN50_RS25885 (LNN50_25890) | 58520..59473 | - | 954 | WP_072097371 | SPFH domain-containing protein | - |
| LNN50_RS25890 (LNN50_25895) | 59519..59713 | - | 195 | WP_001127358 | DUF1187 family protein | - |
| LNN50_RS25895 (LNN50_25900) | 59706..60158 | - | 453 | WP_000101552 | CaiF/GrlA family transcriptional regulator | - |