T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 28199..56270
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN50_RS25255 (LNN50_25260) | 24171..24605 | + | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |
| LNN50_RS25260 (LNN50_25265) | 24602..25364 | + | 763 | Protein_35 | plasmid SOS inhibition protein A | - |
| LNN50_RS25265 (LNN50_25270) | 25342..25521 | - | 180 | WP_001309233 | hypothetical protein | - |
| LNN50_RS25270 (LNN50_25275) | 25543..25692 | + | 150 | Protein_37 | plasmid maintenance protein Mok | - |
| LNN50_RS25275 (LNN50_25280) | 25634..25759 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| LNN50_RS25280 (LNN50_25285) | 26078..26374 | - | 297 | Protein_39 | hypothetical protein | - |
| LNN50_RS25285 (LNN50_25290) | 26674..26970 | + | 297 | WP_001272251 | hypothetical protein | - |
| LNN50_RS25290 (LNN50_25295) | 27081..27902 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| LNN50_RS25295 (LNN50_25300) | 28199..28801 | - | 603 | WP_000243713 | transglycosylase SLT domain-containing protein | virB1 |
| LNN50_RS25300 (LNN50_25305) | 29124..29507 | + | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LNN50_RS25305 (LNN50_25310) | 29701..30372 | + | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| LNN50_RS25310 (LNN50_25315) | 30509..30736 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| LNN50_RS25315 (LNN50_25320) | 30769..31128 | + | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| LNN50_RS25320 (LNN50_25325) | 31143..31454 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| LNN50_RS25325 (LNN50_25330) | 31476..32042 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| LNN50_RS25330 (LNN50_25335) | 32029..32757 | + | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| LNN50_RS25335 (LNN50_25340) | 32757..34208 | + | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LNN50_RS25340 (LNN50_25345) | 34198..34764 | + | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| LNN50_RS25345 (LNN50_25350) | 34751..35071 | + | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| LNN50_RS25350 (LNN50_25355) | 35068..35583 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| LNN50_RS25355 (LNN50_25360) | 35718..35939 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| LNN50_RS25360 (LNN50_25365) | 35932..36408 | + | 477 | WP_000549587 | hypothetical protein | - |
| LNN50_RS25365 (LNN50_25370) | 36488..36706 | + | 219 | WP_000556745 | hypothetical protein | - |
| LNN50_RS25370 (LNN50_25375) | 36734..37081 | + | 348 | WP_000836682 | hypothetical protein | - |
| LNN50_RS25375 (LNN50_25380) | 37207..39837 | + | 2631 | WP_000069777 | type IV secretion system protein TraC | virb4 |
| LNN50_RS25380 (LNN50_25385) | 39834..40220 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| LNN50_RS25385 (LNN50_25390) | 40217..40849 | + | 633 | WP_001203728 | type-F conjugative transfer system protein TraW | traW |
| LNN50_RS25390 (LNN50_25395) | 40846..41838 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| LNN50_RS25395 (LNN50_25400) | 41868..42173 | + | 306 | WP_000224416 | hypothetical protein | - |
| LNN50_RS25400 (LNN50_25405) | 42182..42820 | + | 639 | WP_001080256 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LNN50_RS25405 (LNN50_25410) | 42817..44667 | + | 1851 | WP_000821856 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LNN50_RS25410 (LNN50_25415) | 44694..44951 | + | 258 | WP_000864353 | conjugal transfer protein TrbE | - |
| LNN50_RS25415 (LNN50_25420) | 44944..45687 | + | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LNN50_RS25420 (LNN50_25425) | 45701..46045 | + | 345 | WP_000556796 | conjugal transfer protein TrbA | - |
| LNN50_RS25425 (LNN50_25430) | 46164..46448 | + | 285 | WP_000624194 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LNN50_RS25430 (LNN50_25435) | 46435..46980 | + | 546 | WP_000059831 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LNN50_RS25435 (LNN50_25440) | 46910..47257 | + | 348 | WP_001309242 | P-type conjugative transfer protein TrbJ | - |
| LNN50_RS25440 (LNN50_25445) | 47238..47630 | + | 393 | WP_000660699 | F-type conjugal transfer protein TrbF | - |
| LNN50_RS25445 (LNN50_25450) | 47617..48990 | + | 1374 | WP_000944331 | conjugal transfer pilus assembly protein TraH | traH |
| LNN50_RS25450 (LNN50_25455) | 48987..51809 | + | 2823 | WP_001007039 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LNN50_RS25455 (LNN50_25460) | 51825..52310 | + | 486 | WP_000605870 | hypothetical protein | - |
| LNN50_RS25460 (LNN50_25465) | 52359..53090 | + | 732 | WP_000782451 | conjugal transfer complement resistance protein TraT | - |
| LNN50_RS25465 (LNN50_25470) | 53293..54030 | + | 738 | WP_000199905 | hypothetical protein | - |
| LNN50_RS25470 (LNN50_25475) | 54081..56270 | + | 2190 | WP_017901267 | type IV conjugative transfer system coupling protein TraD | virb4 |