T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 50769..90738
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN50_RS23560 (LNN50_23565) | 48485..50776 | - | 2292 | WP_001289275 | F-type conjugative transfer protein TrbC | - |
| LNN50_RS23565 (LNN50_23570) | 50769..51839 | - | 1071 | WP_000151576 | IncI1-type conjugal transfer protein TrbB | trbB |
| LNN50_RS23570 (LNN50_23575) | 51858..53066 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| LNN50_RS23575 (LNN50_23580) | 53358..53510 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| LNN50_RS23580 (LNN50_23585) | 53582..53833 | - | 252 | WP_001291965 | hypothetical protein | - |
| LNN50_RS26385 | 54333..54428 | + | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| LNN50_RS23590 (LNN50_23595) | 54493..54630 | - | 138 | WP_047088497 | hypothetical protein | - |
| LNN50_RS23595 (LNN50_23600) | 54675..55901 | - | 1227 | WP_024186316 | RNA-guided endonuclease TnpB family protein | - |
| LNN50_RS23600 (LNN50_23605) | 55960..56364 | + | 405 | WP_001175009 | IS200/IS605 family transposase | - |
| LNN50_RS23605 (LNN50_23610) | 56696..56905 | - | 210 | WP_032178830 | hemolysin expression modulator Hha | - |
| LNN50_RS23610 (LNN50_23615) | 57003..57665 | - | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LNN50_RS23615 (LNN50_23620) | 57736..59904 | - | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| LNN50_RS23620 (LNN50_23625) | 60001..60585 | - | 585 | WP_001476649 | IncI1-type conjugal transfer protein TraX | - |
| LNN50_RS23625 (LNN50_23630) | 60614..61816 | - | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| LNN50_RS23630 (LNN50_23635) | 61783..62397 | - | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| LNN50_RS23635 (LNN50_23640) | 62397..65441 | - | 3045 | WP_001024782 | IncI1-type conjugal transfer protein TraU | traU |
| LNN50_RS23640 (LNN50_23645) | 65531..66331 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| LNN50_RS23645 (LNN50_23650) | 66315..66503 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| LNN50_RS23650 (LNN50_23655) | 66567..66971 | - | 405 | WP_021497835 | IncI1-type conjugal transfer protein TraR | traR |
| LNN50_RS23655 (LNN50_23660) | 67022..67549 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| LNN50_RS23660 (LNN50_23665) | 67549..68253 | - | 705 | WP_001493811 | IncI1-type conjugal transfer protein TraP | traP |
| LNN50_RS23665 (LNN50_23670) | 68253..69542 | - | 1290 | WP_001271991 | conjugal transfer protein TraO | traO |
| LNN50_RS23670 (LNN50_23675) | 69545..70528 | - | 984 | WP_001191880 | IncI1-type conjugal transfer protein TraN | traN |
| LNN50_RS23675 (LNN50_23680) | 70539..71231 | - | 693 | WP_000138551 | DotI/IcmL family type IV secretion protein | traM |
| LNN50_RS23680 (LNN50_23685) | 71228..71575 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| LNN50_RS23685 (LNN50_23690) | 71593..75357 | - | 3765 | WP_033560228 | LPD7 domain-containing protein | - |
| LNN50_RS23690 (LNN50_23695) | 75447..75998 | - | 552 | WP_000014586 | phospholipase D family protein | - |
| LNN50_RS23695 (LNN50_23700) | 76013..76303 | - | 291 | WP_001299214 | hypothetical protein | traK |
| LNN50_RS23700 (LNN50_23705) | 76300..77448 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| LNN50_RS23705 (LNN50_23710) | 77445..78263 | - | 819 | WP_032220737 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| LNN50_RS23710 (LNN50_23715) | 78260..78718 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| LNN50_RS23715 (LNN50_23720) | 79113..79697 | - | 585 | WP_000977525 | histidine phosphatase family protein | - |
| LNN50_RS23720 (LNN50_23725) | 79757..80959 | - | 1203 | WP_065793176 | conjugal transfer protein TraF | - |
| LNN50_RS23725 (LNN50_23730) | 81045..81869 | - | 825 | WP_001690630 | conjugal transfer protein TraE | traE |
| LNN50_RS23730 (LNN50_23735) | 82020..83174 | - | 1155 | WP_001139955 | site-specific integrase | - |
| LNN50_RS23735 (LNN50_23740) | 83173..83526 | + | 354 | WP_001393368 | hypothetical protein | - |
| LNN50_RS23740 (LNN50_23745) | 84695..84943 | + | 249 | WP_001349157 | hypothetical protein | - |
| LNN50_RS23745 (LNN50_23750) | 84940..86232 | - | 1293 | WP_001417545 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| LNN50_RS23750 (LNN50_23755) | 86232..86888 | - | 657 | WP_001193553 | prepilin peptidase | - |
| LNN50_RS23755 (LNN50_23760) | 86873..87433 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| LNN50_RS23760 (LNN50_23765) | 87443..88057 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| LNN50_RS23765 (LNN50_23770) | 88075..89172 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| LNN50_RS23770 (LNN50_23775) | 89185..90738 | - | 1554 | WP_000362202 | ATPase, T2SS/T4P/T4SS family | virB11 |
| LNN50_RS23775 (LNN50_23780) | 90749..91201 | - | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| LNN50_RS23780 (LNN50_23785) | 91188..92483 | - | 1296 | WP_000752774 | type 4b pilus protein PilO2 | - |
| LNN50_RS23785 (LNN50_23790) | 92476..94158 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| LNN50_RS23790 (LNN50_23795) | 94172..94609 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| LNN50_RS23795 (LNN50_23800) | 94609..95676 | - | 1068 | WP_000742600 | type IV pilus biogenesis lipoprotein PilL | - |