T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 760..33542
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTC53_RS00010 (D616_p151003) | 760..1362 | - | 603 | WP_023908348 | transglycosylase SLT domain-containing protein | virB1 |
| HTC53_RS00015 (D616_p151004) | 1685..2068 | + | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HTC53_RS00020 (D616_p151005) | 2262..2933 | + | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| HTC53_RS00025 (D616_p151006) | 3070..3297 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| HTC53_RS00030 (D616_p151007) | 3330..3689 | + | 360 | WP_016239104 | type IV conjugative transfer system pilin TraA | - |
| HTC53_RS00035 (D616_p151008) | 3704..4015 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| HTC53_RS00040 (D616_p151009) | 4037..4603 | + | 567 | WP_016239103 | type IV conjugative transfer system protein TraE | traE |
| HTC53_RS00045 (D616_p151010) | 4590..5318 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| HTC53_RS00050 (D616_p151011) | 5318..6769 | + | 1452 | WP_001673169 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HTC53_RS00055 (D616_p151012) | 6759..7325 | + | 567 | WP_001526038 | conjugal transfer pilus-stabilizing protein TraP | - |
| HTC53_RS00060 (D616_p151013) | 7312..7635 | + | 324 | WP_023908346 | conjugal transfer protein TrbD | - |
| HTC53_RS00065 (D616_p151014) | 7604..8137 | + | 534 | WP_250696576 | hypothetical protein | - |
| HTC53_RS00070 (D616_p151015) | 8130..8642 | + | 513 | WP_001526035 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTC53_RS00075 (D616_p151016) | 8777..8998 | + | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| HTC53_RS00080 (D616_p151017) | 8991..9404 | + | 414 | WP_000549589 | hypothetical protein | - |
| HTC53_RS00495 | 9397..9594 | + | 198 | Protein_16 | hypothetical protein | - |
| HTC53_RS00085 (D616_p151020) | 9647..10860 | + | 1214 | WP_172685630 | IS3 family transposase | - |
| HTC53_RS00090 (D616_p151021) | 10917..11183 | + | 267 | Protein_18 | hypothetical protein | - |
| HTC53_RS00095 (D616_p151022) | 11264..11482 | + | 219 | WP_000556751 | hypothetical protein | - |
| HTC53_RS00100 (D616_p151023) | 11510..11857 | + | 348 | WP_000836682 | hypothetical protein | - |
| HTC53_RS00105 (D616_p151024) | 11983..14613 | + | 2631 | WP_001526033 | type IV secretion system protein TraC | virb4 |
| HTC53_RS00110 (D616_p151025) | 14610..14996 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| HTC53_RS00115 (D616_p151026) | 14993..15625 | + | 633 | WP_001526032 | type-F conjugative transfer system protein TraW | traW |
| HTC53_RS00120 (D616_p151027) | 15622..16614 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| HTC53_RS00125 (D616_p151028) | 16641..16949 | + | 309 | WP_000412447 | hypothetical protein | - |
| HTC53_RS00130 (D616_p151029) | 17012..17530 | + | 519 | WP_000009087 | hypothetical protein | - |
| HTC53_RS00490 | 17557..17646 | + | 90 | Protein_27 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HTC53_RS00135 (D616_p151031) | 17738..17917 | + | 180 | WP_001750891 | hypothetical protein | - |
| HTC53_RS00500 | 17914..18234 | - | 321 | WP_023908343 | hypothetical protein | - |
| HTC53_RS00145 (D616_p151033) | 18346..18984 | + | 639 | WP_001035183 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HTC53_RS00150 (D616_p151034) | 18981..19352 | + | 372 | WP_000056340 | hypothetical protein | - |
| HTC53_RS00155 (D616_p151035) | 19377..19799 | + | 423 | WP_001229306 | HNH endonuclease signature motif containing protein | - |
| HTC53_RS00160 (D616_p151036) | 19796..21646 | + | 1851 | WP_023908342 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HTC53_RS00165 (D616_p151037) | 21673..21930 | + | 258 | WP_000864309 | conjugal transfer protein TrbE | - |
| HTC53_RS00170 (D616_p151038) | 21923..22666 | + | 744 | WP_001030385 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HTC53_RS00175 (D616_p151039) | 22680..23021 | + | 342 | WP_000556795 | conjugal transfer protein TrbA | - |
| HTC53_RS00180 (D616_p151040) | 23002..23337 | - | 336 | WP_000736414 | hypothetical protein | - |
| HTC53_RS00185 (D616_p151041) | 23418..23702 | + | 285 | WP_000624107 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HTC53_RS00190 (D616_p151042) | 23689..24234 | + | 546 | WP_000059831 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HTC53_RS00195 (D616_p151043) | 24164..24511 | + | 348 | WP_001309242 | P-type conjugative transfer protein TrbJ | - |
| HTC53_RS00200 (D616_p151044) | 24492..24884 | + | 393 | WP_000660700 | F-type conjugal transfer protein TrbF | - |
| HTC53_RS00205 (D616_p151045) | 24871..26244 | + | 1374 | WP_001526028 | conjugal transfer pilus assembly protein TraH | traH |
| HTC53_RS00210 (D616_p151046) | 26241..29066 | + | 2826 | WP_023908339 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HTC53_RS00215 (D616_p151047) | 29063..29572 | + | 510 | WP_000628099 | conjugal transfer entry exclusion protein TraS | - |
| HTC53_RS00220 (D616_p151048) | 29586..30317 | + | 732 | WP_000850422 | conjugal transfer complement resistance protein TraT | - |
| HTC53_RS00225 (D616_p151049) | 30520..31257 | + | 738 | WP_001673178 | hypothetical protein | - |
| HTC53_RS00230 (D616_p151050) | 31308..33542 | + | 2235 | WP_032072830 | type IV conjugative transfer system coupling protein TraD | virb4 |