T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1376..32229
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F0Q62_RS20845 (F0Q62_20850) | 71..1225 | + | 1155 | WP_001139958 | site-specific integrase | - |
| F0Q62_RS20850 (F0Q62_20855) | 1376..2200 | + | 825 | WP_082210287 | conjugal transfer protein TraE | traE |
| F0Q62_RS20855 (F0Q62_20860) | 2286..3488 | + | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| F0Q62_RS20860 (F0Q62_20865) | 3548..4132 | + | 585 | WP_000977522 | histidine phosphatase family protein | - |
| F0Q62_RS20865 (F0Q62_20870) | 4527..4985 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| F0Q62_RS20870 (F0Q62_20875) | 4982..5800 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| F0Q62_RS20875 (F0Q62_20880) | 5797..6945 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| F0Q62_RS20880 (F0Q62_20885) | 6942..7232 | + | 291 | WP_001299214 | hypothetical protein | traK |
| F0Q62_RS20885 (F0Q62_20890) | 7247..7798 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| F0Q62_RS20890 (F0Q62_20895) | 7888..11655 | + | 3768 | WP_001141534 | LPD7 domain-containing protein | - |
| F0Q62_RS20895 (F0Q62_20900) | 11673..12020 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| F0Q62_RS20900 (F0Q62_20905) | 12017..12709 | + | 693 | WP_000138551 | DotI/IcmL family type IV secretion protein | traM |
| F0Q62_RS20905 (F0Q62_20910) | 12720..13703 | + | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| F0Q62_RS20910 (F0Q62_20915) | 13706..14995 | + | 1290 | WP_016231896 | conjugal transfer protein TraO | traO |
| F0Q62_RS20915 (F0Q62_20920) | 14995..15699 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| F0Q62_RS20920 (F0Q62_20925) | 15699..16226 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| F0Q62_RS20925 (F0Q62_20930) | 16277..16681 | + | 405 | WP_016231895 | IncI1-type conjugal transfer protein TraR | traR |
| F0Q62_RS20930 (F0Q62_20935) | 16745..16933 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| F0Q62_RS20935 (F0Q62_20940) | 16917..17717 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| F0Q62_RS20940 (F0Q62_20945) | 17807..20851 | + | 3045 | WP_016231894 | IncI1-type conjugal transfer protein TraU | traU |
| F0Q62_RS20945 (F0Q62_20950) | 20851..21465 | + | 615 | WP_000337398 | IncI1-type conjugal transfer protein TraV | traV |
| F0Q62_RS20950 (F0Q62_20955) | 21432..22634 | + | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| F0Q62_RS20955 (F0Q62_20960) | 22663..23247 | + | 585 | WP_016231893 | IncI1-type conjugal transfer protein TraX | - |
| F0Q62_RS20960 (F0Q62_20965) | 23344..25512 | + | 2169 | WP_016231892 | DotA/TraY family protein | traY |
| F0Q62_RS20965 (F0Q62_20970) | 25586..26236 | + | 651 | WP_001178506 | plasmid IncI1-type surface exclusion protein ExcA | - |
| F0Q62_RS20970 (F0Q62_20975) | 26308..26517 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| F0Q62_RS24290 | 26849..27025 | + | 177 | WP_001054901 | hypothetical protein | - |
| F0Q62_RS24855 | 27090..27185 | - | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| F0Q62_RS20975 (F0Q62_20980) | 27684..27935 | + | 252 | WP_001291965 | hypothetical protein | - |
| F0Q62_RS20980 (F0Q62_20985) | 28007..28159 | - | 153 | WP_001387489 | Hok/Gef family protein | - |
| F0Q62_RS20985 (F0Q62_20990) | 28728..29714 | + | 987 | WP_024194699 | hypothetical protein | - |
| F0Q62_RS20990 (F0Q62_20995) | 29932..31140 | + | 1209 | WP_052978849 | IncI1-type conjugal transfer protein TrbA | trbA |
| F0Q62_RS20995 (F0Q62_21000) | 31159..32229 | + | 1071 | WP_016231890 | IncI1-type conjugal transfer protein TrbB | trbB |
| F0Q62_RS21000 (F0Q62_21005) | 32222..34513 | + | 2292 | WP_016231889 | F-type conjugative transfer protein TrbC | - |
| F0Q62_RS21005 (F0Q62_21010) | 34655..35317 | - | 663 | WP_000835776 | PAS domain-containing protein | - |
| F0Q62_RS21010 (F0Q62_21015) | 35503..36462 | + | 960 | WP_016231888 | sugar phosphate isomerase/epimerase family protein | - |
| F0Q62_RS21015 (F0Q62_21020) | 36484..36861 | + | 378 | WP_001559792 | RidA family protein | - |