T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 192879..202265
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXG32_RS00855 (pRi1724_p152) | 188092..189348 | + | 1257 | WP_234886495 | cytochrome P450 | - |
| HXG32_RS00860 (pRi1724_p153) | 189552..192107 | + | 2556 | WP_010900341 | two-component system VirA-like sensor kinase | - |
| HXG32_RS00865 | 192180..192422 | - | 243 | WP_077768110 | hypothetical protein | - |
| HXG32_RS00870 (pRi1724_p154) | 192879..193601 | + | 723 | WP_010900342 | type IV secretion system lytic transglycosylase VirB1 | virB1 |
| HXG32_RS00875 (pRi1724_p155) | 193601..193966 | + | 366 | WP_010900343 | pilin major subunit VirB2 | virB2 |
| HXG32_RS00880 (pRi1724_p156) | 193963..194289 | + | 327 | WP_010900344 | type IV secretion system protein VirB3 | virB3 |
| HXG32_RS00885 (pRi1724_p157) | 194289..196658 | + | 2370 | WP_010900345 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HXG32_RS00890 (pRi1724_p158) | 196675..197343 | + | 669 | WP_010900346 | pilin minor subunit VirB5 | - |
| HXG32_RS00895 (pRi1724_p159) | 197410..198297 | + | 888 | WP_010900347 | type IV secretion system protein | virB6 |
| HXG32_RS00900 (pRi1724_p160) | 198325..198492 | + | 168 | WP_010900348 | type IV secretion system lipoprotein VirB7 | - |
| HXG32_RS00905 (pRi1724_p161) | 198479..199192 | + | 714 | WP_010900349 | type IV secretion system protein VirB8 | virB8 |
| HXG32_RS00910 (pRi1724_p162) | 199189..200067 | + | 879 | WP_010900350 | P-type conjugative transfer protein VirB9 | virB9 |
| HXG32_RS00915 (pRi1724_p163) | 200067..201197 | + | 1131 | WP_010900351 | type IV secretion system protein VirB10 | virB10 |
| HXG32_RS00920 (pRi1724_p164) | 201231..202265 | + | 1035 | WP_010900352 | P-type DNA transfer ATPase VirB11 | virB11 |
| HXG32_RS00925 (pRi1724_p165) | 202537..203226 | + | 690 | WP_010900353 | winged helix-turn-helix domain-containing protein | - |
| HXG32_RS01005 | 203202..203750 | - | 549 | WP_234886501 | IS5 family transposase | - |
| HXG32_RS01010 | 203666..204031 | - | 366 | WP_012476038 | IS5 family transposase | - |
| HXG32_RS00935 (pRi1724_p166) | 204195..204800 | - | 606 | WP_010900354 | conjugal transfer protein VirC2 | - |
| HXG32_RS00940 (pRi1724_p167) | 204803..205498 | - | 696 | WP_010900355 | conjugal transfer ATPase VirC1 | - |
| HXG32_RS00945 (pRi1724_p168) | 205753..206199 | + | 447 | WP_010900356 | T-DNA border endonuclease subunit VirD1 | - |