T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 6989..28922
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L3249_RS29995 (L3249_30025) | 2752..3447 | - | 696 | WP_254910806 | RepA family replication protein | - |
| L3249_RS30000 (L3249_30030) | 3953..4204 | - | 252 | WP_113394424 | hypothetical protein | - |
| L3249_RS30005 (L3249_30035) | 4216..4749 | - | 534 | WP_032440594 | phospholipase D family protein | - |
| L3249_RS30010 (L3249_30040) | 4795..6987 | - | 2193 | WP_032440593 | F-type conjugative transfer protein TrbC | - |
| L3249_RS30015 (L3249_30045) | 6989..8080 | - | 1092 | WP_050597336 | thioredoxin fold domain-containing protein | trbB |
| L3249_RS30020 (L3249_30050) | 8091..9509 | - | 1419 | WP_063666705 | hypothetical protein | trbA |
| L3249_RS30025 (L3249_30055) | 9611..10234 | - | 624 | WP_032440592 | plasmid IncI1-type surface exclusion protein ExcA | - |
| L3249_RS30030 (L3249_30060) | 10300..12444 | - | 2145 | WP_238076267 | DotA/TraY family protein | traY |
| L3249_RS30035 (L3249_30065) | 12486..13067 | - | 582 | WP_050597335 | conjugal transfer protein TraX | - |
| L3249_RS30040 (L3249_30070) | 13064..14260 | - | 1197 | WP_032440590 | conjugal transfer protein TraW | traW |
| L3249_RS30045 (L3249_30075) | 14270..17317 | - | 3048 | WP_032440589 | conjugal transfer protein | traU |
| L3249_RS30050 (L3249_30080) | 17327..17890 | - | 564 | WP_045325070 | hypothetical protein | traT |
| L3249_RS30055 (L3249_30085) | 17934..18335 | - | 402 | WP_032440588 | DUF6750 family protein | traR |
| L3249_RS30060 (L3249_30090) | 18391..18924 | - | 534 | WP_032440587 | conjugal transfer protein TraQ | traQ |
| L3249_RS30065 (L3249_30095) | 18934..19653 | - | 720 | WP_050597333 | conjugal transfer protein TraP | traP |
| L3249_RS30070 (L3249_30100) | 19660..21000 | - | 1341 | WP_032440586 | conjugal transfer protein TraO | traO |
| L3249_RS30075 (L3249_30105) | 21004..22107 | - | 1104 | WP_077264204 | DotH/IcmK family type IV secretion protein | traN |
| L3249_RS30080 (L3249_30110) | 22118..22786 | - | 669 | WP_032440585 | DotI/IcmL/TraM family protein | traM |
| L3249_RS30085 (L3249_30115) | 22858..23211 | - | 354 | WP_032440584 | hypothetical protein | traL |
| L3249_RS30090 (L3249_30120) | 23245..26658 | - | 3414 | WP_052145516 | LPD7 domain-containing protein | - |
| L3249_RS30095 (L3249_30125) | 26676..26942 | - | 267 | WP_032440577 | IcmT/TraK family protein | traK |
| L3249_RS30100 (L3249_30130) | 26939..28126 | - | 1188 | WP_077255878 | plasmid transfer ATPase TraJ | - |
| L3249_RS30105 (L3249_30135) | 28104..28922 | - | 819 | WP_032440576 | type IV secretory system conjugative DNA transfer family protein | traI |
| L3249_RS30110 (L3249_30140) | 28919..29383 | - | 465 | WP_225546581 | DotD/TraH family lipoprotein | - |
| L3249_RS30115 (L3249_30145) | 29409..29888 | - | 480 | WP_032440574 | lytic transglycosylase domain-containing protein | - |
| L3249_RS30120 (L3249_30150) | 30620..30847 | - | 228 | WP_032440573 | hypothetical protein | - |
| L3249_RS30125 (L3249_30155) | 31457..32299 | + | 843 | WP_032440572 | helix-turn-helix domain-containing protein | - |
| L3249_RS30130 (L3249_30160) | 32359..33288 | + | 930 | WP_032440581 | hypothetical protein | - |
| L3249_RS30135 (L3249_30165) | 33281..33775 | + | 495 | WP_032440571 | molybdopterin-dependent oxidoreductase | - |