T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 66512..95332
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LR951_RS27935 (LR951_27875) | 61614..61826 | + | 213 | WP_013023815 | hypothetical protein | - |
| LR951_RS27940 (LR951_27880) | 61837..62061 | + | 225 | WP_004152719 | hypothetical protein | - |
| LR951_RS27945 (LR951_27885) | 62142..62462 | + | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LR951_RS27950 (LR951_27890) | 62452..62730 | + | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| LR951_RS27955 (LR951_27895) | 62731..63144 | + | 414 | WP_013023817 | helix-turn-helix domain-containing protein | - |
| LR951_RS27960 (LR951_27900) | 63280..64488 | - | 1209 | WP_015344990 | IS256 family transposase | - |
| LR951_RS27965 (LR951_27905) | 65296..66117 | + | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| LR951_RS27970 (LR951_27910) | 66150..66479 | + | 330 | WP_011977736 | DUF5983 family protein | - |
| LR951_RS27975 (LR951_27915) | 66512..66997 | - | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| LR951_RS27980 (LR951_27920) | 67429..67821 | + | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LR951_RS27985 (LR951_27925) | 68051..68752 | + | 702 | WP_004194113 | hypothetical protein | - |
| LR951_RS27990 (LR951_27930) | 68838..69038 | + | 201 | WP_004194116 | TraY domain-containing protein | - |
| LR951_RS27995 (LR951_27935) | 69107..69475 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LR951_RS28000 (LR951_27940) | 69489..69794 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LR951_RS28005 (LR951_27945) | 69814..70380 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| LR951_RS28010 (LR951_27950) | 70367..71107 | + | 741 | WP_013023821 | type-F conjugative transfer system secretin TraK | traK |
| LR951_RS28015 (LR951_27955) | 71107..72531 | + | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LR951_RS28020 (LR951_27960) | 72645..73229 | + | 585 | WP_013023822 | type IV conjugative transfer system lipoprotein TraV | traV |
| LR951_RS28025 (LR951_27965) | 73361..73771 | + | 411 | WP_009309869 | hypothetical protein | - |
| LR951_RS28030 (LR951_27970) | 73877..74095 | + | 219 | WP_015344987 | hypothetical protein | - |
| LR951_RS28035 (LR951_27975) | 74096..74407 | + | 312 | WP_015344986 | hypothetical protein | - |
| LR951_RS28040 (LR951_27980) | 74474..74878 | + | 405 | WP_004197817 | hypothetical protein | - |
| LR951_RS28045 (LR951_27985) | 75254..75652 | + | 399 | WP_013609531 | hypothetical protein | - |
| LR951_RS28050 (LR951_27990) | 75724..78363 | + | 2640 | WP_013023824 | type IV secretion system protein TraC | virb4 |
| LR951_RS28055 (LR951_27995) | 78363..78752 | + | 390 | WP_004197815 | type-F conjugative transfer system protein TrbI | - |
| LR951_RS28060 (LR951_28000) | 78752..79378 | + | 627 | WP_009309871 | type-F conjugative transfer system protein TraW | traW |
| LR951_RS28065 (LR951_28005) | 79420..79809 | + | 390 | WP_004194992 | hypothetical protein | - |
| LR951_RS28070 (LR951_28010) | 79806..80795 | + | 990 | WP_009309872 | conjugal transfer pilus assembly protein TraU | traU |
| LR951_RS28075 (LR951_28015) | 80808..81446 | + | 639 | WP_011977786 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LR951_RS28080 (LR951_28020) | 81505..83460 | + | 1956 | WP_013023827 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LR951_RS28085 (LR951_28025) | 83492..83746 | + | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| LR951_RS28090 (LR951_28030) | 83724..83972 | + | 249 | WP_004152675 | hypothetical protein | - |
| LR951_RS28095 (LR951_28035) | 83985..84311 | + | 327 | WP_004152676 | hypothetical protein | - |
| LR951_RS28100 (LR951_28040) | 84332..85084 | + | 753 | WP_048337413 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LR951_RS28105 (LR951_28045) | 85095..85334 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LR951_RS28110 (LR951_28050) | 85306..85863 | + | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LR951_RS28115 (LR951_28055) | 85909..86352 | + | 444 | WP_013023828 | F-type conjugal transfer protein TrbF | - |
| LR951_RS28120 (LR951_28060) | 86330..87709 | + | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| LR951_RS28125 (LR951_28065) | 87709..90558 | + | 2850 | WP_013609534 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LR951_RS28130 (LR951_28070) | 90561..91094 | + | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| LR951_RS28135 (LR951_28075) | 91280..92011 | + | 732 | WP_013023830 | conjugal transfer complement resistance protein TraT | - |
| LR951_RS28140 (LR951_28080) | 92204..92893 | + | 690 | WP_013023831 | hypothetical protein | - |
| LR951_RS28145 (LR951_28085) | 93020..95332 | + | 2313 | WP_013023832 | type IV conjugative transfer system coupling protein TraD | virb4 |