T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1..21218
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVO52_RS25615 (LVO52_25580) | 1..567 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| LVO52_RS25620 (LVO52_25585) | 554..1294 | + | 741 | WP_004152497 | type-F conjugative transfer system secretin TraK | traK |
| LVO52_RS25625 (LVO52_25590) | 1294..2718 | + | 1425 | WP_159118796 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LVO52_RS25630 (LVO52_25595) | 2791..3375 | + | 585 | WP_020277945 | type IV conjugative transfer system lipoprotein TraV | traV |
| LVO52_RS25635 (LVO52_25600) | 3956..4246 | + | 291 | WP_032104549 | hypothetical protein | - |
| LVO52_RS25640 (LVO52_25605) | 4270..4488 | + | 219 | WP_004195468 | hypothetical protein | - |
| LVO52_RS25645 (LVO52_25610) | 4489..4821 | + | 333 | Protein_6 | hypothetical protein | - |
| LVO52_RS25650 (LVO52_25615) | 4866..5270 | + | 405 | WP_032446647 | hypothetical protein | - |
| LVO52_RS25655 (LVO52_25620) | 5312..5626 | + | 315 | WP_108523849 | FmdE family protein | - |
| LVO52_RS25660 (LVO52_25625) | 5634..6032 | + | 399 | WP_164995996 | hypothetical protein | - |
| LVO52_RS25665 (LVO52_25630) | 6104..8743 | + | 2640 | WP_032104555 | type IV secretion system protein TraC | virb4 |
| LVO52_RS25670 (LVO52_25635) | 8743..9132 | + | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| LVO52_RS25675 (LVO52_25640) | 9132..9767 | + | 636 | WP_020325113 | type-F conjugative transfer system protein TraW | traW |
| LVO52_RS25680 (LVO52_25645) | 9802..10203 | + | 402 | WP_016831047 | hypothetical protein | - |
| LVO52_RS25685 (LVO52_25650) | 10200..11189 | + | 990 | WP_032104558 | conjugal transfer pilus assembly protein TraU | traU |
| LVO52_RS25690 (LVO52_25655) | 11210..11386 | + | 177 | WP_162866177 | hypothetical protein | - |
| LVO52_RS25695 (LVO52_25660) | 11465..12112 | + | 648 | WP_015632510 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LVO52_RS25700 (LVO52_25665) | 12171..14126 | + | 1956 | WP_032104560 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LVO52_RS25705 (LVO52_25670) | 14158..14412 | + | 255 | WP_032104561 | conjugal transfer protein TrbE | - |
| LVO52_RS25710 (LVO52_25675) | 14390..14638 | + | 249 | WP_032104562 | hypothetical protein | - |
| LVO52_RS25715 (LVO52_25680) | 14651..14977 | + | 327 | WP_004144402 | hypothetical protein | - |
| LVO52_RS25720 (LVO52_25685) | 14998..15750 | + | 753 | WP_049016816 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LVO52_RS25725 (LVO52_25690) | 15761..16000 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LVO52_RS25730 (LVO52_25695) | 15972..16529 | + | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LVO52_RS25735 (LVO52_25700) | 16575..17018 | + | 444 | WP_014343488 | F-type conjugal transfer protein TrbF | - |
| LVO52_RS25740 (LVO52_25705) | 16996..18375 | + | 1380 | WP_075203337 | conjugal transfer pilus assembly protein TraH | traH |
| LVO52_RS25745 (LVO52_25710) | 18375..21218 | + | 2844 | WP_159118798 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LVO52_RS25750 (LVO52_25715) | 21229..21753 | + | 525 | WP_015632518 | conjugal transfer entry exclusion protein | - |
| LVO52_RS25755 (LVO52_25720) | 22062..22793 | + | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| LVO52_RS25760 (LVO52_25725) | 23155..25458 | + | 2304 | Protein_29 | type IV conjugative transfer system coupling protein TraD | - |