T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 62189..90304
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRM34_RS27840 (LRM34_27840) | 58239..58619 | + | 381 | WP_020802391 | hypothetical protein | - |
| LRM34_RS27845 (LRM34_27845) | 58685..59032 | + | 348 | WP_032445771 | hypothetical protein | - |
| LRM34_RS27850 (LRM34_27850) | 59127..59273 | + | 147 | WP_004152750 | hypothetical protein | - |
| LRM34_RS27855 (LRM34_27855) | 59324..60157 | + | 834 | WP_032445769 | N-6 DNA methylase | - |
| LRM34_RS27860 (LRM34_27860) | 60973..61794 | + | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| LRM34_RS27865 (LRM34_27865) | 61827..62156 | + | 330 | WP_011977736 | DUF5983 family protein | - |
| LRM34_RS27870 (LRM34_27870) | 62189..62674 | - | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| LRM34_RS27875 (LRM34_27875) | 63065..63481 | + | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LRM34_RS27880 (LRM34_27880) | 63681..64400 | + | 720 | WP_172691949 | conjugal transfer protein TrbJ | - |
| LRM34_RS27885 (LRM34_27885) | 64533..64736 | + | 204 | WP_171486139 | TraY domain-containing protein | - |
| LRM34_RS27890 (LRM34_27890) | 64801..65169 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LRM34_RS27895 (LRM34_27895) | 65183..65488 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LRM34_RS27900 (LRM34_27900) | 65508..66074 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| LRM34_RS27905 (LRM34_27905) | 66061..66801 | + | 741 | WP_172691947 | type-F conjugative transfer system secretin TraK | traK |
| LRM34_RS27910 (LRM34_27910) | 66801..68225 | + | 1425 | WP_185775340 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LRM34_RS27915 (LRM34_27915) | 68298..68882 | + | 585 | WP_040120377 | type IV conjugative transfer system lipoprotein TraV | traV |
| LRM34_RS27920 (LRM34_27920) | 69205..69423 | + | 219 | WP_004171484 | hypothetical protein | - |
| LRM34_RS27925 (LRM34_27925) | 69424..69741 | + | 318 | WP_114473059 | hypothetical protein | - |
| LRM34_RS27930 (LRM34_27930) | 69808..70212 | + | 405 | WP_100748549 | hypothetical protein | - |
| LRM34_RS27935 (LRM34_27935) | 70237..70635 | + | 399 | WP_167875005 | hypothetical protein | - |
| LRM34_RS27940 (LRM34_27940) | 70707..73346 | + | 2640 | WP_150388098 | type IV secretion system protein TraC | virb4 |
| LRM34_RS27945 (LRM34_27945) | 73346..73735 | + | 390 | WP_013214025 | type-F conjugative transfer system protein TrbI | - |
| LRM34_RS27950 (LRM34_27950) | 73735..74370 | + | 636 | WP_020325113 | type-F conjugative transfer system protein TraW | traW |
| LRM34_RS27955 (LRM34_27955) | 74405..74806 | + | 402 | WP_004194979 | hypothetical protein | - |
| LRM34_RS27960 (LRM34_27960) | 74803..75792 | + | 990 | WP_032441886 | conjugal transfer pilus assembly protein TraU | traU |
| LRM34_RS27965 (LRM34_27965) | 75805..76443 | + | 639 | WP_015065635 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LRM34_RS27970 (LRM34_27970) | 76502..78457 | + | 1956 | WP_172691973 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LRM34_RS27975 (LRM34_27975) | 78489..78725 | + | 237 | WP_114499720 | conjugal transfer protein TrbE | - |
| LRM34_RS28165 | 78722..78907 | + | 186 | WP_042922350 | hypothetical protein | - |
| LRM34_RS27980 (LRM34_27980) | 78953..79279 | + | 327 | WP_016529362 | hypothetical protein | - |
| LRM34_RS27985 (LRM34_27985) | 79300..80052 | + | 753 | WP_172691972 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LRM34_RS27990 (LRM34_27990) | 80063..80302 | + | 240 | WP_009309875 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LRM34_RS27995 (LRM34_27995) | 80274..80831 | + | 558 | WP_172691971 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LRM34_RS28000 (LRM34_28000) | 80878..81324 | + | 447 | WP_172691970 | conjugal transfer protein TrbF | - |
| LRM34_RS28005 (LRM34_28005) | 81314..82681 | + | 1368 | WP_185775342 | conjugal transfer pilus assembly protein TraH | traH |
| LRM34_RS28010 (LRM34_28010) | 82681..85530 | + | 2850 | WP_172691976 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LRM34_RS28015 (LRM34_28015) | 85536..86063 | + | 528 | WP_040120388 | conjugal transfer protein TraS | - |
| LRM34_RS28020 (LRM34_28020) | 86252..86983 | + | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| LRM34_RS28025 (LRM34_28025) | 87176..87865 | + | 690 | WP_172691968 | hypothetical protein | - |
| LRM34_RS28030 (LRM34_28030) | 87992..90304 | + | 2313 | WP_228303505 | type IV conjugative transfer system coupling protein TraD | virb4 |